Bordetella pseudohinzii: BBN53_12040
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Entry
BBN53_12040 CDS
T04945
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
bpdz
Bordetella pseudohinzii
Brite
KEGG Orthology (KO) [BR:
bpdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpdz03000
]
BBN53_12040
Transcription factors [BR:
bpdz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BBN53_12040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
DUF302
Motif
Other DBs
NCBI-ProteinID:
ANY16561
LinkDB
All DBs
Position
complement(2653482..2654396)
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AA seq
304 aa
AA seq
DB search
MRGFDSYLTFQKLEVFCTVAELGSVTRAADRLCIAQPVVTAHLRSLESRLGYSLVARSGR
NIALTEAGERVYRWAAEVISRTREIERELAGMEKGSAGNAVIATSMSVGSYSLPPLISAF
HRKHPDGLITVQISNPQAALDATRIGGCDFAVILLAPTQDLGGLMAIPLWEDDLLLVCAP
SSQWTRGGPQDVDLQAVPFISTPKNLARRELEDMQLRKYGLETRHVVMELGHPEAAKHAV
REDIGLSFMLACSVRDDIRRGDLVALEWPGMSMKIPTYLVHREDKRFSAYQSGLVQFLLE
SSGR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcgggggtttgattcctacttaaccttccagaagcttgaggtcttttgtacggtggct
gaattgggaagcgtgacgcgcgctgcggacaggctttgcattgcacaaccggtcgtcacg
gcacacttgcgcagcctggagtccaggcttggctatagcttggttgcgcggtccggacgc
aatattgcgctcaccgaggcgggcgaaagggtgtatcggtgggcagcggaagtcatatcc
agaacgcgggaaattgagcgggagcttgccggcatggaaaaaggcagtgccggcaatgca
gtgattgcgacgtctatgtcggtgggctcatattccctgccgcccctcatctcggcgttc
caccgcaagcatcctgatgggctgatcacggtccagatctccaacccgcaagctgctttg
gacgccacccggatcggcggctgcgatttcgccgtgattcttcttgccccaacccaggat
cttggggggctcatggcaattccgctctgggaagacgatctactactagtgtgtgcaccg
tcgagccaatggacgcgcggcggaccgcaggacgtggacctgcaagccgtaccgttcatc
agcaccccgaagaacctggcacgccgggaactcgaagacatgcagttgcgcaagtacggg
ttagagacgcgccatgtcgtgatggagcttgggcatcctgaggcggcgaagcacgcagtc
cgcgaggacatcggcttgagcttcatgctggcctgttcagttcgtgatgatatccggcga
ggcgacctggtcgccttggagtggcccggaatgtccatgaagattcccacatacctggtg
cacagggaggacaagcgcttttctgcttatcagtctggccttgtgcagttcttgcttgag
tcttcgggacgctga
DBGET
integrated database retrieval system
