KEGG   Bordetella pseudohinzii: BBN53_12590
Entry
BBN53_12590       CDS       T04945                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
bpdz  Bordetella pseudohinzii
Pathway
bpdz03420  Nucleotide excision repair
bpdz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bpdz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BBN53_12590
   03430 Mismatch repair
    BBN53_12590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpdz03400]
    BBN53_12590
Enzymes [BR:bpdz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BBN53_12590
DNA repair and recombination proteins [BR:bpdz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BBN53_12590
   MMR (mismatch excision repair)
    Other MMR factors
     BBN53_12590
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_30 AAA_12 Viral_helicase1 AAA_22
Other DBs
NCBI-ProteinID: ANY16657
UniProt: A0A0J6CDU8
LinkDB
Position
complement(2773685..2775949)
AA seq 754 aa
MMLDKLNPEQRAAVTLEPQHALVLAGAGSGKTRVLTTRMAWLIQTGQASPFGILAVTFTN
KAAREMLTRMAALLPIDTRGLWIGTFHGLCNRMLRAHHRDAGLPQTFQILDTADQLAAIK
RLLKAQGIDDEKYPPRDVQRFIAGAKEEGQRPADVEAWDAHRRKLIEIYQLYEAQCQREG
VVDFAELLLRAYELLSRNAPVREHYQRRFRHILVDEFQDTNTLQYKWLRLLAGGGAAIFA
VGDDDQSIYAFRGANVGNMADFERDYAHGRVIRLEQNYRSFGHILDAANALIGHNQGRLG
KNLWTDQGEGEPIRVIEQPSDGMEAQWVVDEIRSLIHEGRSRSEIAVLYRSNAQSRVLEH
ALFSAGVAYKVYGGLRFFERQEVKHALAYLRLIANPDDDTSFMRVVNFPTRGIGARTLEQ
LADAASSGQTSLFGAVARVPGKGGANLAAFAQLIGRLEAETRDLPLPEMVEHLIEESGLK
AHYQAEREGAERLENLNELITAAAVFAAEENFDGLPAGRIPDAGADGPDAPPVAGMTPLA
AFLSHAALEAGDNQAQAGQDAVQLMTVHAAKGLEFDAVFITGLEEGLFPHENSILEPAGL
EEERRLMYVAITRARERLYLTLAQSRMLHGQTRYAMRSRFLEEIPEAHLKWLTPRAGAGN
GFASGGIAWTERGDAYGRRQTGAIAPRAPRTGTSGVTVGEIQYRVGQGVRHARFGEGTII
GLSGNGQDAQAQIQFRDVGTKTLALGIAKLDIIA
NT seq 2265 nt   +upstreamnt  +downstreamnt
atgatgctcgacaagctcaatcccgaacaacgcgccgctgtcaccctcgaaccgcaacac
gccctggtcctggccggggcgggtagcggcaagacacgggtcctcacgacccgcatggcc
tggctgattcaaaccggccaggccagtccttttggcattctggccgtcacctttaccaat
aaggccgcccgcgagatgttgacgcgcatggcggccctattgcctatcgacacccgcggt
ctttggatcgggacgtttcacggcctgtgcaaccgcatgctgcgcgcccaccatcgcgac
gccggcctgccgcagaccttccagatcctcgacaccgccgaccagctggccgccatcaag
cgcctgctcaaggcccagggcatcgacgacgagaaatacccgccgcgcgatgtgcagcgc
tttatcgccggggccaaggaagagggccagcggcccgccgacgtcgaggcctgggacgcc
catcgccgcaagctgatcgagatctaccagctctacgaagcgcagtgccagcgagaaggc
gtggtcgatttcgccgagctgctgctgcgcgcctacgagctgctgtcacgcaacgccccg
gtgcgcgagcactatcaacggcgcttccgccatatcctggtcgatgagttccaggacacc
aatacgctgcagtacaaatggctcaggctgctggccggcggcggcgcggccatcttcgcc
gtgggcgacgacgatcagtccatctacgccttccggggcgccaatgtcggcaatatggcc
gatttcgagcgcgattacgcccacgggcgggtcatccggctggagcagaactaccgctcc
ttcggccatatcctggatgccgccaatgccctgatcggccataaccagggccgcctgggc
aagaacctctggacggaccagggcgagggcgagccgatacgggtgatcgagcagccctcg
gatggcatggaagcccagtgggtggtcgatgaaatccgttcgctcatccacgagggccgt
tcgcgcagcgaaatcgccgtgctctatcgcagcaatgcgcaatcgcgcgtgctcgagcat
gcgttgttttccgcgggcgtggcctacaaagtctatggcggcctgcgcttcttcgaacgc
caggaagtcaagcacgcgctggcctacctgcggctgatcgccaatccggacgatgacacc
tccttcatgcgggttgtcaatttcccgacgcgcggcataggcgcgcgcaccctggaacag
ctggccgacgccgcctcgagcggccagaccagtctgttcggcgccgtggcccgcgtgccc
ggcaagggcggcgccaatctggccgctttcgcccaattgatcggccgcctggaggcggag
acgcgcgacctgcccttgcccgagatggtcgagcatctgatcgaggaaagcggcctgaag
gcgcattaccaggccgagcgcgaaggcgccgaacgcctcgagaacctcaacgaactcatc
accgcggcggcggtgttcgccgccgaggaaaacttcgacggcctgccggcggggcggatt
cccgatgccggcgcggacgggcccgatgcgccgcccgtggccggcatgacgccgctggcg
gcctttctgtcgcacgcggcgctggaggcgggcgacaaccaggcgcaagccggccaggac
gccgtgcagctcatgacggtgcacgcggccaagggcctggagttcgatgcggtgttcatc
accggcctcgaagagggtctgtttccgcatgagaacagcatcctcgagcccgcgggactc
gaagaagaacgccgtctcatgtatgtggccatcacgcgcgcgcgcgaacggctctacctg
acgctggcgcaaagccgcatgctgcatggccagacgcgctacgccatgcgctcgcgcttc
ctggaagaaatccccgaggcccatctcaagtggcttacgccgcgggcgggcgccggcaat
ggtttcgcaagcggcggcatcgcctggaccgagcgtggcgacgcctatggccggcgccag
accggcgccatcgcgccgcgcgcgccgcgcacgggcaccagcggcgtgaccgtgggcgag
atccagtaccgggtcggccaaggggtcaggcatgcgcgcttcggcgaaggcaccatcatc
ggcctgagcggcaatggccaggacgcccaggcgcagatccagttccgcgatgtcggcacc
aagacgctggcgctgggcatcgccaagctggacatcatcgcctga

DBGET integrated database retrieval system