Bordetella pseudohinzii: BBN53_15420
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Entry
BBN53_15420 CDS
T04945
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpdz
Bordetella pseudohinzii
Pathway
bpdz03420
Nucleotide excision repair
bpdz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpdz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBN53_15420
03430 Mismatch repair
BBN53_15420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpdz03400
]
BBN53_15420
Enzymes [BR:
bpdz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBN53_15420
DNA repair and recombination proteins [BR:
bpdz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBN53_15420
MMR (mismatch excision repair)
Other MMR factors
BBN53_15420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
NACHT
AAA_12
HHH
Motif
Other DBs
NCBI-ProteinID:
ANY17147
UniProt:
A0A0J6BT06
LinkDB
All DBs
Position
complement(3373914..3375989)
Genome browser
AA seq
691 aa
AA seq
DB search
MTKPTAEASDPLDELNPQQREAATYGVTPGAAPASALLVIAGAGSGKTSTLAHRVAHLIR
HGADPQRLLLLTFSRRAAQEMDRRVAGVLRRVMKLDGAAPSLPWAGTFHSIGARLLRDCA
TRIGLSEAFTVHDRGDAEDLMGMLRHELGLTATQNRFPLKGTCLSIYSRVINSQEPLGDV
LARAFPWCAQWEDELKRLFQAYMRAKQDQQILDYDDLLLYWAEMMADPGIARDVSARFDH
VLVDEYQDTNRLQASILLSMKPDGRGLTVVGDDAQSIYAFRAATVRNILDFPGQFGAHVI
ALERNYRSTQPILDASNAVIAEAPERYAKALWTDRASAQKPELVNVSDEAGQARWVADQV
LARREEGTRLIAQAALFRAASHSAALELELTRRNIPFVKFGGLRFLEAAHVKDLLSLLRW
AENPRSRMAGFRVAQLLPGIGPATAGKLMDAMAEAADPLACLAAFKPGAGPQWDGLVAVF
AALRGRQSGWPADIDLALAWYAPLLEHLYDDARVRRADLEQLARLAAGYPTRERFLTELT
LDPPSATSDESGKPLLDEDYMILSTIHSAKGQEWKAVYILNAVDGCIPSDMATDSGEEIE
EERRLLYVAMTRARERLQILVPQRFYVHQQSGLGDRHVYAARTRFLPDSMMPLFEHLPKP
PALPFGRGEGPQGAAGAPVIDVGQRLRKLFS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaccgaccgccgaggccagcgatccgctggacgaactcaaccctcagcagcgc
gaagccgccacctatggcgtgacgcccggcgcggcgcccgcgtccgcgctcctggtgatc
gccggggcgggctcgggcaagaccagcaccctggcgcatcgcgtggcgcatttgatccgc
catggcgccgatccccagcgcttgctgctgctgacgttttcgcgccgcgcggcccaggaa
atggaccgccgggtggcgggcgtgctgcgccgggtcatgaagctggatggcgccgcgccc
tccctgccctgggcgggcaccttccacagcattggcgcgcgcctgctgcgcgactgcgcc
acgcgcatcggcctgtccgaagccttcacggttcatgaccgcggcgatgccgaagacctc
atgggcatgctgcgccatgagctgggcctgacggccacgcagaaccgcttcccgctcaag
ggcacttgcctgtcgatctattcgcgcgtgatcaacagccaggagcccttgggcgatgtg
ctggcgcgcgctttcccctggtgcgcccaatgggaggacgagctcaagcgtctgttccag
gcctatatgcgggccaagcaggatcagcagatcctggactacgacgacctgctgctttat
tgggccgaaatgatggccgaccccggcatcgcgcgcgatgtgtcggcgcgctttgaccat
gtgctggtcgacgaataccaggacaccaatcgcctgcaggccagcatcctgctgtccatg
aagcccgatggccgcggcctgaccgtcgtgggcgatgatgcccagtccatctatgccttt
cgcgccgccaccgtgcgcaacatcctggattttccgggtcagttcggcgcccacgtcatt
gcgctggagcgcaattaccgcagcacgcagcccatactggatgcgtccaatgccgtgatc
gccgaagcgcccgagcgctacgccaaggcgctgtggacggaccgcgccagcgcgcagaag
cccgagctggtcaacgtcagcgacgaagccggccaggcgcgctgggtggccgaccaggtc
ctggcacggcgcgaggagggcacgcgcctgatcgcgcaagccgcgctgtttcgcgccgcc
agccacagcgccgcgcttgaactggagctgacgcggcgcaatattcccttcgtgaaattc
ggcggcctgcgttttctggaggccgcgcatgtcaaggacctgctgtcgctgctgcgctgg
gccgagaacccccgttcgcgcatggcgggatttcgcgtggcccagttgttgcccggcatc
gggccggccacggcgggcaagctcatggacgccatggccgaagccgccgatcccctggcc
tgtctggccgccttcaagcccggcgcgggcccgcaatgggacgggctggtggccgttttc
gcggcgctgcgcgggcggcagtcgggctggccggcggacatcgacctcgccctggcctgg
tatgcgccgctgctggagcatctgtatgacgatgcgcgcgtgcgccgcgccgacctcgaa
cagctggcgcggctggcggcgggctatcccacgcgcgaacgcttcctgaccgaactgacg
ctggatccgccctcggccaccagcgacgagtccggcaagccgctgctggacgaggactac
atgattctatcgaccatccattcggccaagggccaggaatggaaggcggtatacatcctc
aatgccgtggatggctgcatcccatccgacatggcgaccgacagcggcgaagaaatcgaa
gaagagcgccgcctgctctacgtggccatgacgcgcgcccgcgaacgcttgcagatcctc
gtgccccagcgcttttatgtgcatcagcaaagcggcctgggcgaccgccatgtctatgcc
gcgcgcacgcgcttcctgcccgacagcatgatgccgctgttcgagcatctgcccaagccg
ccggcgctgcctttcgggcgcggcgagggcccgcagggggccgcgggcgccccggtgatc
gacgtcggccagcggctacgcaagctgttctcctga
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