Bordetella pseudohinzii: BBN53_15615
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Entry
BBN53_15615 CDS
T04945
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bpdz
Bordetella pseudohinzii
Pathway
bpdz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpdz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBN53_15615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpdz03400
]
BBN53_15615
Enzymes [BR:
bpdz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BBN53_15615
DNA repair and recombination proteins [BR:
bpdz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBN53_15615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
AlaDh_PNT_C
Myb_DNA-binding_2
Motif
Other DBs
NCBI-ProteinID:
ANY17177
UniProt:
A0A0J6BSX8
LinkDB
All DBs
Position
complement(3421438..3422082)
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AA seq
214 aa
AA seq
DB search
MPSSDLESIKPDYWEDAVAHLMRRDRILKKIIPQHSHTWLMSRGTPFVTLARAIVGQQIS
TKAADGLWTRLLDVAGKRPTPATVLRAGVAGLRAAGLSQRKAEYVQDLADHFGQRKVHPE
RWATMDDEAVISELVAIRGIGRWTAEMFLIFNLQRPDVLPLDDLGLLKAISLHYFSGEPV
SRFEAREVSLAWQPWRTVATWYLWRSLEPTPVQY
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgcccagttccgatctcgaatccatcaagcccgattattgggaagacgccgtggcgcac
ctgatgcgccgcgaccgcattctcaagaaaatcatcccccagcacagccatacttggctg
atgtcgcgcggcacgccattcgtgacgctggcccgcgccatcgtcgggcagcagatctcg
accaaggccgccgacggcctctggacgcggctgctcgacgtggccggcaagcggcccacc
ccggccacggtgctgcgcgccggcgtggctgggctgcgcgccgccggcctgtcccagcgc
aaggccgaatatgtgcaggatctggccgatcatttcggccagcgcaaagttcaccccgag
cgttgggcgacgatggacgacgaagccgtcatttcggagctggttgccatccgcggcatc
gggcgctggacggcggagatgtttttgattttcaatctccagcgcccggatgtgctgccg
ctggatgatcttgggttgctcaaggcaatctcgttacactatttcagcggcgagcccgtt
tcgcgcttcgaggcccgagaggtctctttggcgtggcagccctggcgtaccgtggcgacc
tggtatttgtggcgcagcctggaaccgaccccggtccagtactga
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