KEGG   Bordetella pseudohinzii: BBN53_17065
Entry
BBN53_17065       CDS       T04945                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
bpdz  Bordetella pseudohinzii
Pathway
bpdz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpdz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BBN53_17065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpdz03400]
    BBN53_17065
Enzymes [BR:bpdz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BBN53_17065
DNA repair and recombination proteins [BR:bpdz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BBN53_17065
    RecFOR pathway proteins
     BBN53_17065
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 Mg_chelatase TIP49 AAA_16 nSTAND3 AAA_22 Rad17 AAA_3 DUF815 AAA_14 RNA_helicase TsaE Bac_DnaA NTPase_1 NB-ARC AAA_17 Sigma54_activ_2 AAA_28 ABC_tran IstB_IS21 Parvo_NS1 AAA_18 AAA_25 NACHT AAA_24 NPHP3_N AAA_33 AAA_PrkA
Other DBs
NCBI-ProteinID: ANY17435
UniProt: A0A0J6EZ91
LinkDB
Position
3696688..3697755
AA seq 355 aa
MAIQSDSLSSRPDAHRLVTPAPVSPNEESIERALRPKALQEYVGQQRAREQLEIFIAAAR
KRGESLDHVLLFGPPGLGKTTLAHIIAHEMGVQLRQTSGPVLERPGDLAALLTNLERNDV
LFIDEIHRLSPVVEEILYPALEDFQIDILIGEGPAARSVKLDLQPFTLVGATTRAGMLTN
PLRDRFGIVSRLEFYNTDDLASIVTRSAGLLNADITADGAREVARRARGTPRIANRLLRR
VRDYAEVKANGRIDTDAASQALAMLEVDPQGLDLMDRKLLEAIVHKFDGGPVGVDSLAAA
IGEERDTIEDVIEPYLIQHGYLQRTPRGRMATQTTWRHLGLQPPAGSQTASGDLF
NT seq 1068 nt   +upstreamnt  +downstreamnt
atggcaatccagtccgattcgctctcctcccgccccgatgcccaccgcctggtgacaccg
gcgcctgtctcgcccaacgaagaatccatcgagcgcgccctgcggcccaaggccctgcag
gagtacgtggggcagcagcgcgcgcgcgagcagctggagatcttcatcgcggcggcgcgc
aagcgcggcgaatcgctggaccacgtcctgctcttcggcccgccgggcctgggcaagacc
acgctggcccacatcatcgcccacgagatgggcgtgcagctgcgccagacctccggcccc
gtgctggagcgccccggcgacctggccgcgctgctgaccaatcttgaacgcaacgatgtg
ctgttcatcgacgaaatccaccgcctctcgccggtcgtcgaagaaatcctctaccccgcg
ctcgaagacttccagatcgatatcctgatcggcgaaggtccggccgcgcgcagcgtcaag
ctggacctgcagccgttcacgctggtgggcgcgaccacgcgcgccggcatgctcaccaac
ccgctgcgcgaccgcttcggcatcgtgtcgcgcctggagttctacaacacggacgacctg
gccagcatcgtcacgcgcagcgccggcctactcaatgccgatatcaccgccgacggcgcg
cgcgaagtcgcccgccgcgcgcgcggcacgccgcgcatcgccaaccggctgctgcgccgg
gtgcgcgactacgcggaggtcaaggccaacgggcgcatcgataccgacgccgccagccag
gccctggccatgctcgaagtcgacccccagggcctggacctgatggaccgcaagctgctg
gaagccatcgtgcataaattcgatggcggcccggtgggcgtggacagcctggccgcggcc
atcggcgaagaacgcgacactatcgaagacgtgatcgagccctatctgatccagcacggc
tatctgcagcgcacgccgcgcggccgcatggcgacccagaccacctggcgccacctgggc
ctgcagcccccggccggcagccagaccgcctcgggcgatctgttctag

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