Bordetella pseudohinzii: BBN53_17530
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Entry
BBN53_17530 CDS
T04945
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
bpdz
Bordetella pseudohinzii
Brite
KEGG Orthology (KO) [BR:
bpdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpdz03009
]
BBN53_17530
Enzymes [BR:
bpdz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BBN53_17530
Ribosome biogenesis [BR:
bpdz03009
]
Prokaryotic type
rRNA helicases
BBN53_17530
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
P-loop_SecA
ResIII
CMS1
EcoRI
Motif
Other DBs
NCBI-ProteinID:
ANY17519
LinkDB
All DBs
Position
complement(3794975..3796363)
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AA seq
462 aa
AA seq
DB search
MTDTSFSSLPLLPALLENLQSLGFEQMTPIQAQSLPLILEGRDLIAQAKTGSGKTAAFGL
GVLQTLDVGRLVPQGLVLCPTRELADQVAQELRRLARLIPNVKILTLCGGAAARPQAESL
ARGAHLVVGTPGRIQDHLARGSLDLSGLKTLVLDEADRMVDMGFYDDIAAIASHCPLKRQ
TLLFSATYPDNIRKLSARFLRNPAEVKVEAQHDASQIEQIFYEIGEDERLDAVVALLAHF
RPLSTLAFCNTKIRSHDLVERLQAAGISAQALNGDLEQRERDEILIQFANQSCAVLVATD
VAARGLDIQNLGAVINVDVTKDTEVHVHRIGRSGRGEQKGLALSLCSAEEMRWANLIEQY
QGAPLKWADIKTLRPKSDRPLRAPMVTLCIQGGKKDKLRPGDLLGALTGDGGLTFEQVGK
INITEFTAYVALDRQIAKQAFSRISNSNIKGRRFRMRFLEAF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatacgtctttttcttccctgccgcttctgccggcgctgctggaaaatctgcag
agcctgggctttgagcagatgacgcccatccaggcgcagagcctgcccctcatcctggag
ggccgcgacctgatcgcgcaggccaagaccggcagcggcaagactgccgccttcggcctg
ggtgtattgcagacgctggatgtcggccgcctcgtgccgcaagggctggtgctgtgcccg
acccgcgaactggccgaccaggtcgcgcaggaattgcgccgcctggcccggctcatcccc
aacgtcaagatcctgaccctgtgcggcggcgccgcggcgcgtccgcaggccgagtcgctg
gcccggggcgcccatctggtggtgggcacgcccggccgcatccaggaccatctggcgcgc
ggcagcctggatctgtctggcctgaaaaccctggtgctcgacgaagccgaccgcatggtg
gatatggggttctacgacgatatcgccgccattgcctcgcattgcccgctcaagcgccag
accctgctgttctcggccacctatccggacaatatccgcaagctcagcgcccgcttcctg
cgcaacccggccgaggtcaaggtcgaggcccagcatgacgccagccagatcgagcagatc
ttctacgaaatcggcgaggacgagcggctggacgccgtggtcgccctgctggcgcacttc
cggcccctgtccacgctggcgttctgcaataccaagatccgcagccacgacctggtcgag
cgcctgcaggccgcgggcatcagcgcccaggcgctcaacggcgacctggagcagcgcgag
cgcgacgagatcctgatccagttcgccaaccagagctgcgccgtgctggtggccaccgat
gtggccgcgcgggggctggacatccagaacctgggcgcggtgatcaatgtggacgtgacc
aaggacaccgaagtccatgtgcatcgcatcggccgcagcggccggggcgagcagaaaggg
ctggccttgagcctgtgctcggccgaggaaatgcgctgggccaatctgatcgagcagtac
cagggcgcgccgctcaaatgggccgatatcaagacgctgcgtcccaagtcggaccgcccc
ttgcgcgcgcccatggtcaccttgtgcatccagggcggcaagaaagacaagctgcggcct
ggcgacctgctcggcgccctgaccggcgacggcggcctgacattcgagcaggtgggcaag
atcaatatcaccgagttcaccgcctatgtcgccctggaccgccagatcgccaagcaggct
ttctcgcgcatctccaatagcaacatcaagggccgtcgcttccgcatgcgctttctggaa
gcgttctga
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