Bordetella pseudohinzii: BBN53_20345
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Entry
BBN53_20345 CDS
T04945
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bpdz
Bordetella pseudohinzii
Pathway
bpdz00300
Lysine biosynthesis
bpdz00470
D-Amino acid metabolism
bpdz01100
Metabolic pathways
bpdz01110
Biosynthesis of secondary metabolites
bpdz01120
Microbial metabolism in diverse environments
bpdz01230
Biosynthesis of amino acids
Module
bpdz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bpdz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BBN53_20345
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BBN53_20345
Enzymes [BR:
bpdz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BBN53_20345
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ANY18027
UniProt:
A0A0J6C6G0
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All DBs
Position
4395164..4396453
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AA seq
429 aa
AA seq
DB search
MTAPSSQPQLAGHPYFHYKHGVLHAEGVALDILAAKLGTPLYVYSRAALHAAYDSYRQAI
GDRPVLVCYGMKANSNLAVLKEFARLGAGFDIVSGGELRRVLAVGGDPAKIVFSGVGKQA
WEMREALAAGVKCFNVESVAELHRLSKVAQAEGQVARVSLRVNPDVDAQTHPYISTGLKE
NKFGIAIDEALHAYQTAASLPGLRVVGVDCHIGSQLIDVSPYFDALDKLLDLIDRMAAQG
IAIEHLDLGGGLGIRYTDEVPPSPKTLLDEVFNRLQARGYGHLHLVLEPGRSLVGNAGIL
LTTVQFLKHNEARNFAVVDAAMNDLLRPTLYQAYHGVRAVVPRETETRVYDVVGPVCESG
DWLAKERSLAIEQDDVLALESAGAYGMVMAGNYNTRPRAAEVMVDGEQYHIVRQRESIED
LLRGESTLP
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgccttcctcccagccccaactggctggccatccgtatttccattacaagcat
ggcgtgctgcacgccgaaggcgtcgccctggacatcctggcggccaagctgggcacgccg
ctgtacgtgtattcgcgcgccgccctgcatgccgcctatgacagctaccgccaggccatc
ggcgaccggccggtgctggtctgttacggcatgaaggccaattccaacctggcggtgctc
aaagaattcgcccgcctgggcgccggctttgacatcgtgtcgggcggcgaactcaggcgc
gtgctggccgtgggcggcgacccggccaagatcgtgttctcgggcgtgggcaagcaggca
tgggaaatgcgcgaggcgctggccgccggcgtcaagtgcttcaatgtcgagtccgtcgcc
gaactgcatcgcctgtccaaggtcgcccaggccgagggccaggtggcgcgcgtctcgctg
cgcgtcaatcccgatgtcgacgcgcagacccatccctatatttccaccggcctgaaggaa
aacaagttcggcatcgcgatcgacgaagcgctgcacgcctaccagaccgcggccagcctg
cccggcctgcgggtcgtcggcgtggactgccatatcggctcgcagctcatcgatgtcagc
ccgtatttcgatgcgctggacaagctgctcgacctcatcgaccgcatggccgcgcaaggc
atcgccatcgagcacctggacctgggcggcggcctgggcatccgctacacggatgaagtc
ccgccttcgcccaagacgctgctggacgaggtcttcaatcgcctgcaggcgcgcggctac
ggccatctgcacctggtgctggaaccgggccgctcgctggtcggcaacgccggcatcctg
ttgaccacggtgcaattcctcaagcacaacgaggcgcgcaacttcgccgtggtcgacgcc
gccatgaacgacctgctgcgtcccacgctctaccaggcctatcatggcgtgcgcgcggtg
gtgccgcgcgagaccgaaacgcgcgtctatgacgtggtcggcccggtgtgcgaaagcggc
gactggctggccaaggagcgcagcctggccatcgagcaagacgacgtgctggcgctggaa
tcggccggcgcctacggcatggtcatggccggcaactacaacacccgcccccgcgccgcc
gaggtcatggtcgacggcgagcaataccatatcgtgcgccagcgcgaatccatcgaggac
ctgctcaggggcgaatccaccctgccctga
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