KEGG   Bordetella pertussis Tohama I: BP0340
Entry
BP0340            CDS       T00139                                 
Symbol
alkB
Name
(GenBank) alkylated DNA repair protein
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
bpe  Bordetella pertussis Tohama I
Brite
KEGG Orthology (KO) [BR:bpe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpe03400]
    BP0340 (alkB)
Enzymes [BR:bpe01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     BP0340 (alkB)
DNA repair and recombination proteins [BR:bpe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    BP0340 (alkB)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2
Other DBs
NCBI-ProteinID: CAE40717
UniProt: Q7W028
LinkDB
Position
complement(342537..343187)
AA seq 216 aa
MQADLFDAEQTGIRTRLGEQAWVLRGFALPWLDALLPALRAVIAQAPLRHMATPGGFTMS
VALTNCGALGWTTDAHGYRYRPDDPQTGLPWPPMPQAFAQLAREAAAQAGFAGFDPDACL
VNRYAPGARMSLHQDKNERDFGAPIVSVSLGLPAMFLFGGARRDERPARIPLLHGDVAVW
GGVDRLRYHGVMPLAEGQHPLLGRQRINFTLRRAGA
NT seq 651 nt   +upstreamnt  +downstreamnt
atgcaagccgacctcttcgacgccgagcaaaccggcatccgcacgcgcctgggcgagcag
gcgtgggtgctgcggggtttcgccctgccctggctggacgccttgctgcccgccttgcgc
gcggtcatcgcgcaggcgccgctgcgccatatggccacgccaggcggtttcaccatgtcg
gtggcgctgaccaattgcggcgcgctgggctggaccaccgacgcgcacggctaccgctac
cggcccgacgatccgcagaccggcttgccgtggccgccgatgccgcaggcgttcgcgcaa
ctggcgcgcgaggcggcggcgcaggcgggctttgccggcttcgatcccgacgcctgcctg
gtcaaccgctatgcgcccggcgcgcgcatgtcgctgcaccaggacaagaacgagcgcgac
ttcggcgcgcccatcgtgtcggtgtcgctgggcctgcccgccatgttcctgttcggcggc
gcgcggcgcgacgagcggcccgcccgcataccgctgctgcacggcgacgtggccgtatgg
ggcggcgtggaccggctgcgctaccacggcgtgatgccgctggccgagggccaacatccg
ctgctgggccgccagcgcatcaacttcacgctgcgccgcgccggcgcctga

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