Bordetella pertussis Tohama I: BP0406
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Entry
BP0406 CDS
T00139
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bpe
Bordetella pertussis Tohama I
Pathway
bpe03030
DNA replication
bpe03430
Mismatch repair
bpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BP0406 (dnaQ)
03430 Mismatch repair
BP0406 (dnaQ)
03440 Homologous recombination
BP0406 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpe03032
]
BP0406 (dnaQ)
03400 DNA repair and recombination proteins [BR:
bpe03400
]
BP0406 (dnaQ)
Enzymes [BR:
bpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BP0406 (dnaQ)
DNA replication proteins [BR:
bpe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BP0406 (dnaQ)
DNA repair and recombination proteins [BR:
bpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BP0406 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CAE44737
UniProt:
Q7VSK5
LinkDB
All DBs
Position
complement(405774..406508)
Genome browser
AA seq
244 aa
AA seq
DB search
MRQIIFDTETTGLDPAQGHRIVEIGCVEIVNRMVTGNNLHLYLNPDRDSDPEALAVHGLT
TEFLADKPRFAEVAEQFLAFIADAELIAHNAAFDVKFFNAELQRIGRDPLNTHCENIVDS
LLHARSLHPGKRNSLDALCDRYGISNAHRTLHGALLDSQLLAEVWLAMTRGQDALLIDVD
DQGANANGALVLGKFDASVLTVLAASEAELAEHAAYLQALDKAVGGACAWRAIEPLPAES
GQPG
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagatcattttcgatacggaaaccaccggcctggacccggcccagggccatcgc
atcgtcgaaatcggttgcgtcgagatcgtcaaccggatggtcacgggcaacaatctgcac
ctctacctgaaccccgaccgcgacagcgaccccgaggcgctggcggtgcacggcctgacc
accgagttcctggccgacaagccgcgctttgccgaagtggccgagcaattcctggctttc
atcgccgacgccgagctgatcgcccacaacgccgcgttcgacgtcaagttcttcaacgcc
gagctgcagcgcatcggccgcgatccgctgaacacccactgcgagaacattgtcgattcg
ctgctgcatgcgcgcagcctgcaccccggcaagcgcaactcgctcgacgcgctgtgcgac
cgctacggcatctccaacgcccaccggaccctgcacggcgccttgctcgactcgcagctg
ctggccgaggtctggctggcgatgacgcgcggccaggacgccttgctgatcgacgtcgat
gaccagggcgcgaacgccaacggcgcgttggtgctgggcaagttcgatgcctcggtgctg
accgtgctggccgccagcgaagcggaattggccgagcatgcggcctatctgcaggcgctg
gacaaggcggtcggcggggcctgcgcctggcgcgcgatcgagccgctgcccgcggaatcc
gggcagcctggctga
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integrated database retrieval system
