Bordetella pertussis Tohama I: BP0489
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Entry
BP0489 CDS
T00139
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bpe
Bordetella pertussis Tohama I
Brite
KEGG Orthology (KO) [BR:
bpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpe03032
]
BP0489 (gyrB)
03400 DNA repair and recombination proteins [BR:
bpe03400
]
BP0489 (gyrB)
Enzymes [BR:
bpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BP0489 (gyrB)
DNA replication proteins [BR:
bpe03032
]
Prokaryotic type
DNA Topoisomerases
BP0489 (gyrB)
DNA repair and recombination proteins [BR:
bpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BP0489 (gyrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CAE44818
UniProt:
Q7VSE2
LinkDB
All DBs
Position
complement(500903..503356)
Genome browser
AA seq
817 aa
AA seq
DB search
MSDQQNTTPENTGYGADSIKMLKGLEAVRKRPGMYIGDTSDGTGLHHMVFEVVDNAIDEA
LAGHCDDIVVTIHTDNSISVTDNGRGIPTDIHKDDEFGRSAAEIVMTELHAGGKFDQNSY
KVSGGLHGVGVSCVNALSEWLRLTIRRNGQVHQMEFRQGQRVAPLTATGPTDKRGTEVRF
LADPAIFTNIEYHYEILSKRLRELSFLNNGVKVRLVDQRQGKEENFAFSGGVKGFVEYIN
RSKSVLHLNVFAVSAESSAGGVLVGVEVAMQWNDSYSESVLCFTNNIPQRDGGTHLTGLR
AAMTRVLNKYIADNELAKKAKVETTGDDMREGLACVLSVKVPEPKFSSQTKDKLVSSEVR
PAVEDAVARTLETWLLEHPNDAKALCGKIVEAARAREAARKAREMTRRKSVLEGAGLPGK
LADCQEKDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKARFDRLIASEQ
IATLITALGTSIGPDFNIDKLRYHRLIIMTDADVDGAHIRTLLLTLLYRQMPELVARGHV
YIAQPPLYKVKVGRDERYLKDDQEEAQFMLQLALKDAELIPSQGAAPIRGEALNELARQY
VLADAVISRLSRVFDVAALSALAEGVEIDLEDAERTKASAQRLSDALHAASPANGVEVVA
EYDDVAEKHRLAVRRMHHGNVRVSVLDADFVRGADYAVLAKSAKTFLGLVGAGAIVARGE
GDKRKEQFVSDFREAMQWLRGEAERGLSKQRYKGLGEMNPEQLWETTMDPKVRRLLRVQI
EDAIAADEVFTTLMGDDVEPRRAFIETHALSAGNIDA
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcaacagaacaccactcccgagaacaccggctatggcgccgattcgatcaag
atgctcaaggggctggaggccgtgcgcaagcgcccaggcatgtacatcggcgatacctcc
gatggcacgggcttgcaccacatggtgttcgaagtggtcgacaacgcgatcgacgaggcg
ctggcgggccattgcgacgacatcgtcgtcaccatccataccgacaactcgatctccgtc
accgacaacggccgcggcatcccgaccgacatccacaaggatgacgagttcggccgcagc
gccgccgaaatcgtgatgaccgagctgcacgcgggcggcaagttcgaccagaactcgtac
aaggtgtcgggcggcctgcacggcgtgggcgtatcctgcgtgaacgccctgtccgagtgg
ctgcgcctgacgatccgccgcaacggccaggtgcatcagatggaatttcgccaggggcag
cgcgtcgcgcccctgacggcgaccggcccgaccgacaagcgcggcacggaagtgcgtttc
ctggccgatccggccatcttcaccaacatcgagtaccactacgagattctctcgaagcgc
ctgcgcgagctgtcgttcctgaacaatggcgtgaaggtccgcctggtcgaccagcgccag
ggcaaggaggagaactttgcgttctccggcggcgtgaaagggtttgtcgagtacatcaac
cgcagcaagtcggtgctgcatctcaacgtgttcgcggtcagcgccgaatcgtcggccggc
ggcgtgctggtgggcgtggaagtggccatgcagtggaacgacagctacagcgaaagcgtg
ctgtgtttcaccaacaacattccgcagcgcgacggcggcacgcacctgacgggcctgcgc
gcggccatgacgcgcgtgctcaacaagtacatcgccgacaacgagctggccaagaaggcc
aaggtcgagaccaccggcgacgacatgcgcgaaggcctggcctgcgtgctgtcggtgaag
gtgcccgagcccaagttcagcagccagaccaaggacaagctggtctccagcgaagtgcgt
ccggccgtcgaggacgcggtggcgcgcacgctggaaacctggctgctggagcaccccaac
gacgccaaggcgctgtgcggcaagatcgtcgaggccgcgcgtgcgcgcgaggcggcgcgc
aaggcgcgcgagatgacgcgccgcaagagcgtgctggaaggcgccggcctacccggcaag
ctggccgactgtcaggaaaaggacccggcgctgtgcgagctgtacatcgtcgagggcgat
tcggcaggcggttcggccaagcagggccgcgaccgcaagttccaggccatcctgcccctg
cgcggcaaggtgctcaacgtcgagaaggcgcgttttgaccgcctcatcgccagcgagcag
atcgccacgctgatcacggccctgggcaccagcatcggccccgatttcaatatcgacaag
ctgcgctaccaccgcctgatcatcatgaccgacgcggacgtggacggcgcgcacatccgc
acgctgctgctgacgctgctgtatcgccagatgcccgagctggtggcgcgcggccacgtc
tatatcgcgcagccgccgctgtacaaggtcaaggtcggccgcgacgagcgctacctgaag
gatgaccaggaagaagcgcaattcatgctgcaactggcgctcaaggacgccgagctgatt
cccagccagggcgccgccccgatccgtggcgaggcgctcaacgaactggcgcgccagtac
gtgctggccgacgcggtcatttcccgcctgtcgcgcgtgttcgacgtggccgcgctgtcg
gcgctggccgaaggcgtcgagatcgacctcgaggacgccgaacgcaccaaggcatcggcg
cagcgcctgtccgacgcgttgcacgcggccagccccgccaatggcgtggaagtggtggcc
gagtacgacgacgtggccgaaaagcaccgcctggcggtgcgccgcatgcaccacggcaac
gtgcgtgtcagcgtgctggatgcggacttcgtgcgcggcgccgactacgcggtgctggcc
aagtcggccaagacgttcctgggcctggtcggcgccggcgccatcgtggcgcgtggcgaa
ggcgacaagcgcaaggaacagttcgtgtccgatttccgcgaggccatgcaatggttgcgc
ggcgaagccgagcgcggcctgagcaagcagcgctacaagggcctgggcgaaatgaacccg
gagcagttgtgggaaaccacgatggacccgaaggtgcgccgcctgctgcgggtgcagatc
gaagatgccatcgcggcggacgaggtcttcaccacgctgatgggcgacgacgtcgagccg
cgccgcgcgttcatcgaaacgcatgcgctgtcggcgggcaacatcgacgcctga
DBGET
integrated database retrieval system
