Bordetella pertussis Tohama I: BP0709
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Entry
BP0709 CDS
T00139
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
bpe
Bordetella pertussis Tohama I
Pathway
bpe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bpe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BP0709 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bpe01007
]
BP0709 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpe03016
]
BP0709 (aspS)
03029 Mitochondrial biogenesis [BR:
bpe03029
]
BP0709 (aspS)
Enzymes [BR:
bpe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
BP0709 (aspS)
Amino acid related enzymes [BR:
bpe01007
]
Aminoacyl-tRNA synthetase
Class II (A)
BP0709 (aspS)
Transfer RNA biogenesis [BR:
bpe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
BP0709 (aspS)
Prokaryotic type
Other AARSs
BP0709 (aspS)
Mitochondrial biogenesis [BR:
bpe03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
BP0709 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
CAE41019
UniProt:
Q7W001
LinkDB
All DBs
Position
723420..725210
Genome browser
AA seq
596 aa
AA seq
DB search
MRTCYTGQVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRTGLAQIVFDPDNAEAFGTA
ERLRNEFCISITGLVRLRPEGTANAELASGEVEVLCQQVEILNASVTPPFQLDDDNLSET
TRLTHRVLDLRRPQMQHNLMLRYRVSIEVRKYLDQLGFIDIETPMLTKSTPEGARDYLVP
SRVNAGYFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFL
NEVEIREIFEGMIRHVFKVVQDVDLPTPFPIMSWTEAMQRYGSDKPDLRVNLEFTDMTDV
MRDVDFKVFASAATTAGSRVVALRVQGGGEMSRSEIDAYTQFVGIYGAKGLAYIKVNDVA
KGREGLQSPIVKNLHDAALAELVKRTGAQNGDIIFFGADRAKVVNDAIGALRVKIGHSEF
GKKAGLFSGGWKPLWVVDFPMFEYDEEENRYTAAHHPFTSPKDGHEDFLESDPGKAVAKA
YDMVLNGWEIGGGSVRIHREEVQSKVFRALKIDAEEAREKFGFLLDALQYGAPPHGGIAF
GLDRIITMMAGAESIRDVIAFPKTQRAQCLLTGAPSEVDEKQLRELHIRLRNVEVK
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacctgctacaccggccaggtttgccgtgaccatctcggccagactgtcaccctg
tacggctgggtgaaccgccgccgcgaccacggcggggtcatcttcatcgacctgcgcgat
cgcacgggcctggcgcaaatcgtgttcgaccccgacaatgccgaggctttcggcacggcc
gagcgcctgcgcaacgagttctgcatcagcatcaccggcctggtgcgcctgcgccccgaa
ggcacggccaacgccgagctggcctcgggcgaggtcgaagtgctgtgccagcaggtcgag
atcctcaacgcgtcggtgacgccgccgttccagctggatgacgacaacctgtcggaaacc
acccggctgacccatcgcgtgctggacctgcgccgcccgcagatgcagcacaacctgatg
ctgcgctaccgcgtctcgatcgaagtgcgcaagtacctcgaccagctcggcttcatcgac
atcgaaacgccgatgctgaccaagagcacgcccgagggcgcgcgcgactacctggtgccg
tcgcgggtcaacgccgggtatttctttgccctgccgcaatcgccgcagctgttcaagcag
atgctgatggtctcgggtttcgaccgttactaccagatcaccaagtgcttccgcgacgaa
gacctgcgcgccgaccgccagcccgaattcacccagatcgattgcgagacttcgttcctg
aacgaagtcgagatccgtgaaatcttcgaaggcatgatccgccatgtattcaaggtggtg
caggacgtggacctgcccacgccgttccccatcatgagctggacggaggccatgcagcgc
tatggctcggacaagcccgacctgcgcgtcaacctggaattcaccgacatgaccgacgtc
atgcgcgacgtggatttcaaggtgttcgcctcggccgccaccaccgcgggcagccgcgtc
gtggcgctgcgcgtgcagggcggcggcgagatgtcgcgcagcgagatcgacgcctacacg
caattcgtcggcatctacggcgccaagggcctggcctacatcaaggtcaacgacgtggcc
aagggccgcgagggcctgcagtcgcccatcgtcaagaacctgcacgatgccgcgctggcc
gaactggtcaagcgcaccggcgcgcagaacggcgacatcatcttcttcggcgcggatcgc
gccaaggtggtcaacgacgccatcggcgcgctgcgcgtgaagatcggccacagcgaattc
ggcaagaaggccggcctgttcagcggcggctggaagccgctgtgggtcgtcgacttcccc
atgttcgagtacgacgaggaggaaaaccgctataccgccgcgcaccacccgttcaccagc
ccgaaggacggccacgaggacttcctcgaaagcgatccgggcaaggccgtcgccaaggcc
tacgacatggtgctcaacggctgggaaatcggcggcggctcggtgcgtatccaccgcgag
gaagtgcagagcaaggtattccgcgcgctcaagatcgacgccgaggaggcgcgcgagaag
ttcggcttcctgctggacgcgctgcagtatggcgcgccgccgcatggcggcatcgcgttc
ggcctggaccgcatcatcaccatgatggccggcgccgaatccatccgcgacgtgatcgcc
ttccccaagacccagcgtgcgcagtgcctgttgaccggcgcgccgtcggaagtcgacgag
aagcaattgcgcgagctgcacatccgcttgcgcaacgtcgaagtgaaatga
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