Bordetella pertussis Tohama I: BP0955
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Entry
BP0955 CDS
T00139
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bpe
Bordetella pertussis Tohama I
Pathway
bpe00541
Biosynthesis of various nucleotide sugars
bpe01100
Metabolic pathways
bpe01250
Biosynthesis of nucleotide sugars
Module
bpe_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
bpe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BP0955 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bpe01005
]
BP0955 (rfaD)
Enzymes [BR:
bpe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
BP0955 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bpe01005
]
Core region
BP0955 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
CAE41257
UniProt:
Q7VZF5
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All DBs
Position
993540..994529
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AA seq
329 aa
AA seq
DB search
MIVVTGAAGFIGSNLVRGLNRRGIQDIIAVDDLTDGDKFRNLVDCSIADYLDKDEFRERV
RGGNLPALRAVLHQGACSDTTERNGRYMLDNNYRVTLELFEYCQAERVPFLYASSAAVYG
GSSVYVEDPANEHPLNVYGYSKLLFDQVLRTRMDSLTAQVVGLRYFNVYGPHEQHKGRMA
SVAFHNMNQFLAEGHVRLFAGWDGYEDGGQSRDFISVEDVVAVNLHFLDNPDQSGVFNCG
TGRAQPFNDVAAAVVNTLRAERGEAALPLAELVKKGLLRYIPFPDDLKGRYQSYTQADVS
RLRATGFSAPMRDVQTGVSEYVRYWRALK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtggtgaccggcgcggccggctttatcggcagcaatctggtgcgcggcctgaac
cggcgcggcatccaggacatcatcgccgtcgacgacctgaccgacggcgacaaattccgc
aacctcgtcgattgcagcatcgccgactatctcgacaaggacgagttccgcgaacgcgtg
cgcggcggcaacctgccggccttgcgtgccgtgctgcaccagggcgcctgctcggacacc
accgagcgcaacggccgctacatgctggacaacaactaccgcgtcacgctggaactgttc
gagtactgccaggccgagcgcgtgccgttcctgtacgcctcgtcggccgcagtctacggc
ggttcgtcggtgtatgtggaagacccggccaacgagcatccgctcaatgtgtacggctat
tccaagctgctgttcgaccaggtgctgcgcacgcgcatggacagcctgaccgcccaggtg
gtggggctgcgctatttcaacgtgtacgggccgcacgagcagcacaagggccgcatggct
tcggtggccttccacaacatgaaccagttcctggccgaaggccatgtgcgcctgttcgcc
ggctgggatggctacgaggacggcgggcagagccgcgatttcatttcggtcgaagacgtg
gtggcggtcaatctgcatttcctcgacaaccctgaccagtcgggcgttttcaactgcggc
accgggcgcgcccagccgttcaacgacgtggccgcggcggtggtcaataccctgcgcgcc
gaacgcggcgaggcggcgctgccgctggccgaactggtcaagaagggcctgctgcgctat
atcccgttcccggacgatctgaaagggcgctaccagagctacacccaggccgacgtcagc
cggctgcgggcgaccggcttcagcgcgccgatgcgcgatgtacagactggcgtatcggaa
tacgtgcgctattggcgcgccctgaagtag
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