Bordetella pertussis Tohama I: BP1105
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Entry
BP1105 CDS
T00139
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bpe
Bordetella pertussis Tohama I
Pathway
bpe03410
Base excision repair
bpe03430
Mismatch repair
bpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BP1105 (recJ)
03430 Mismatch repair
BP1105 (recJ)
03440 Homologous recombination
BP1105 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpe03400
]
BP1105 (recJ)
DNA repair and recombination proteins [BR:
bpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BP1105 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BP1105 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BP1105 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
UPA_2
Motif
Other DBs
NCBI-ProteinID:
CAE41403
UniProt:
Q7VZ34
LinkDB
All DBs
Position
complement(1154884..1156584)
Genome browser
AA seq
566 aa
AA seq
DB search
MVSPRLIIRTADLQACQHLEAAGIHPLLSRLWAARGVIHPEQTRMAWPALLPPDRLTHSA
HAAAVLADAIEQGKRLLIVADYDCDGATACAVGLRALSAMGADVDFLVPNRFETGYGLSP
AVVELACRHRRGKPDIIITVDNGIASVDGVAAANAAGIGVVITDHHLPGDTLPEALAIVN
PNQPGCGFGSKHLAGVGVIFYMMLALRAELRRRGVYAPDGGPRLDALSDLVALGTVADVV
KLDANNRLLVTQGLQRMRAGRMQPGVRALFAVAGREPRTASGFDLGFALGPRINAAGRLA
DMSLGIACLTTDDEAQTLEMARELDNINRERRTIEAEMRDQALAAMEAPDAAAGATVCVF
DPGWHQGVVGLVASRLKEKFWRPTLAFAPAGEDELRGSGRSIPDVHLRDALDLVSKRHPG
LIRKFGGHAMAAGLTLGSGDFAAFAPAFDAAVRELTGRDRFEPLLETDGSLESGYANAEV
AGLLQQQVWGAGFAAPLFLDEFTVRSQRLVGGKHLKLALERGHQRFDAIWFGHDQSLPER
IQAAYRLEQNIWNGMVSVQLVIEHAA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
gtggtctcgccccgtctgattatccgtactgccgatctgcaagcctgccagcacctcgaa
gcggccggcatccacccgctgctgtcgcgcctgtgggcggcgcgcggcgtcatccacccc
gagcagacccgtatggcgtggcccgcgctgctgccgcccgaccgcctgacccactcggcc
cacgcggccgccgtgctcgccgacgccatcgagcagggcaagcgcctgctcatcgtggcc
gactacgactgcgatggcgccacggcctgcgcggtcggcctgcgcgccctgtcggccatg
ggcgccgacgtggatttcctggttcccaaccgcttcgagaccggctatggcctctcgccg
gcggtcgtcgagctggcctgccgccatcggcgcggcaagcccgacatcatcatcacggtc
gacaacggcatcgccagcgtcgacggcgtggccgccgccaacgccgccggcatcggcgtg
gtcatcaccgaccaccacttgcccggcgacacgctgcccgaggccctggccatcgtcaat
cccaaccagcccggctgcggtttcggctccaagcacctggccggcgtcggcgtcatcttc
tacatgatgctggcgctgcgcgccgagctgcgccgccgcggcgtctacgcgccggatggc
ggcccgcgcctggatgcgctgtccgacctggtggccctgggcacggtggccgacgtggtc
aagctggacgccaacaaccggctgctggtcacgcaggggctgcagcgcatgcgggccggc
cgcatgcagcccggcgtgcgcgccctgttcgccgtggccgggcgcgagccgcgcaccgcc
agcggcttcgacctgggctttgccctcggtccgcgcatcaacgccgccggccggctggcc
gacatgagcctgggcatcgcctgcctgaccaccgacgacgaggcgcagacgctcgaaatg
gcgcgcgagctcgacaacatcaaccgcgaacgccgcaccatcgaagccgagatgcgcgac
caggcgctggccgccatggaggcgcccgacgccgccgccggcgccacggtatgcgtattc
gaccccggctggcaccagggcgtggtcggcctggtggcctcgcgcctgaaggagaagttc
tggcgccccacgctggccttcgccccggccggcgaggacgagctgcgcggctcgggccgc
tcgatccccgacgtgcatttgcgcgacgcgctcgacctggtgtccaagcgccacccgggc
ctgatacgcaagttcggcggccacgccatggccgccggcctgaccctgggcagcggcgat
ttcgccgccttcgccccggccttcgacgccgcggtgcgcgagctcaccgggcgcgaccgc
ttcgagccgctgctcgaaaccgacggctcgctcgaaagcggctacgccaatgccgaagtg
gccggcctgctgcagcagcaggtctggggcgcggggttcgccgccccgctgttcctggac
gaattcaccgtgcgcagccagcgcctggtgggcggcaagcacctgaagctggcgctcgag
cgcggccaccagcgcttcgacgccatctggttcggccacgaccagtccctgcccgagcgc
atccaggccgcctaccggctggagcagaacatctggaatggcatggtgtcggtacagctg
gtcatcgagcacgccgcctga
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