Bordetella pertussis Tohama I: BP1227
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Entry
BP1227 CDS
T00139
Symbol
radA
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
bpe
Bordetella pertussis Tohama I
Brite
KEGG Orthology (KO) [BR:
bpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpe03400
]
BP1227 (radA)
DNA repair and recombination proteins [BR:
bpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BP1227 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
GvpD_P-loop
AAA_22
ChlI
AAA_16
DUF7125
Rad51
AAA_24
Lon_C
AAA_14
SLFN-g3_helicase
nSTAND3
NTPase_1
AAA_5
TackOD1
RecA
Elong_Iki1
AAA_28
ABC_tran
AAA
MCM
NACHT
ATPase_2
Zn_ribbon_tTFIIB
PAXNEB
zf-RING_10
AAA_29
DAP3
zf-C3HC4_2
Motif
Other DBs
NCBI-ProteinID:
CAE41523
UniProt:
Q7VYT2
LinkDB
All DBs
Position
1290181..1291542
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AA seq
453 aa
AA seq
DB search
MAKSRTIYVCAECGGTSLKWQGKCPHCSAWNTLEETVESAAPSAGGHRYAPLAAASPVRS
LSEIEARETPRQPTGLDEFDRVLGGGLVAGAVVLIGGDPGIGKSTLLLQALASLSATTKV
LYVTGEESAEQVALRARRLGLQTGNVDLLAEIRLEAIQAAVSEQKPTVAVIDSIQTLYSG
ELTAAPGSVSQVRECAAQLTRLAKQTGIAIVMIGHVTKDGALAGPRVLEHIVDTVLYFEG
DTHSSFRLVRAFKNRFGAVNELGVFAMTDRGLRGVANPSALFLSQHQQQVAGSCVLATQE
GTRPLLVEVQALVDTSHAPNPRRLTVGLEGNRLAMLLAVMHRHAGVSTYDQDVFVNAVGG
VRITEPAADLPVLLAIMSSLRDKPLPAGLVAFGEIGLAGEIRPAPRGQERLREAAKLGFS
VALIPKANAPRQPIEGLEIWAVDRLDAALDKLR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcccgaaccatctatgtctgcgccgaatgcggcggcaccagcctcaagtgg
caaggcaagtgcccgcactgctcggcctggaataccctggaagaaaccgtggagtccgcc
gcgccctcggccggcgggcatcgctacgcgcccctggcggcagccagcccggtgcgcagc
ttgtccgaaatcgaagcgcgcgagacgccgcgccagcccaccgggctggacgagttcgac
cgcgtgctgggcggcgggctggtcgccggcgcggtggtgctgatcggcggcgaccccggc
atcggcaagtccacgctgctgctgcaggcgctggcctcgctgtcggccacgaccaaggtg
ttgtacgtcaccggtgaagagtcggccgaacaggtcgcgctgcgggcgcgccggctgggc
ctgcagaccggcaatgtcgacttgctggccgagatccggctcgaggcgatccaggcggcc
gtgtccgaacagaagccgaccgtggcggtgatcgattcgatccagacgctctacagcggc
gagctgaccgccgcgccgggctcggtgtcccaggtgcgcgaatgcgcggcgcagctgacg
cggctggccaagcagaccggcatcgccatcgtgatgatcggccacgtcaccaaggacggc
gcgctggccggaccgcgcgtgctcgaacacatcgtcgacacggtgctgtacttcgagggc
gacacgcattcgtcgtttcgcctggtgcgcgcgttcaagaaccgcttcggcgccgtcaac
gagctgggcgtgttcgccatgaccgaccgcggcctgcgcggcgtggccaatccgtccgcg
ctgtttctctcgcagcaccagcagcaggtggccggttcctgcgtgctggcgacccaggaa
gggacgcgcccgctgctggtggaagtgcaggcgctcgtcgatacttcgcatgcgcccaat
ccgcgccgcctgacggtggggctggagggtaatcgcctggccatgctgctggccgtcatg
caccgccatgcgggcgtctcgacctacgaccaggacgtattcgtcaatgccgtgggcggg
gtgcgcatcaccgagccggcggccgacctgccggtactgctggccatcatgtcatcgctg
cgcgacaagccgctgcccgccggcctggtggcgttcggcgagatcggcctggccggcgag
atccggcccgcgccgcgcggccaggagcgcctgcgcgaagcggccaagctggggttcagc
gttgcgctgattcccaaggccaatgcgccgcgccagcctatcgaagggctggagatatgg
gccgtggatcggctggacgccgccctggacaaattgcgttga
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