KEGG   Bordetella pertussis Tohama I: BP1249
Entry
BP1249            CDS       T00139                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
bpe  Bordetella pertussis Tohama I
Brite
KEGG Orthology (KO) [BR:bpe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bpe03016]
    BP1249 (truB)
Enzymes [BR:bpe01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     BP1249 (truB)
Transfer RNA biogenesis [BR:bpe03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    BP1249 (truB)
 Prokaryotic type
    BP1249 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: CAE41545
UniProt: P65852
LinkDB
Position
1314460..1315194
AA seq 244 aa
MAKRRGLALDGVLLLDKPVGLSSNHALQRAKRTVDAAKAGHTGTLDPFATGLLVCCMGRA
TKISGRMLEADKTYQATLQFGEETDSGDLTGHIVARAPDGFAGVEEAALRDVLSRFVGTI
EQIPPMYSALKRDGKPLYEYARAGIELDRPPRQVTIRHIELLSFSGMQAQIDVACSKGTY
IRTLAQDIGRALGCHAHLAALRRTHVGPFSLDRAVTLEALQAMPDAKQALLAMNELPAGL
LPAT
NT seq 735 nt   +upstreamnt  +downstreamnt
atggctaaacgacgcgggctcgcgctcgacggtgtgctgttgctggacaaacccgtgggt
ttgtccagcaaccacgccttgcagcgagccaagcgcaccgtggacgcggccaaggccggt
catacgggaacgctggaccctttcgccactggcctgctggtttgctgcatgggccgggct
accaagatctcgggccgcatgctcgaggccgacaagacctaccaggccacgctgcagttt
ggcgaggagaccgactcgggcgacctgaccggccacatcgtggcccgggccccggacgga
tttgccggtgtcgaagaggcggcgctgcgcgatgtgctgtcacgtttcgtgggcacgatc
gagcagatcccgcccatgtattcggcgctcaagcgcgacggcaagccgctttacgagtac
gcccgggcgggcatcgagctggaccgtccgcccaggcaggtgaccatccgccacatcgag
ctgctgtcgttctccggaatgcaggcgcagatcgatgtggcctgcagcaagggcacctat
atacgcacgctggcccaggacatcggccgcgcgctgggctgccatgcccacctggcggcg
ctgcggcgcacgcacgtcgggccgttttcgctggaccgcgccgtaaccctggaagccctg
caggcgatgcccgacgccaagcaggccttgcttgccatgaatgaattgccggcgggcctg
ctgcccgccacctga

DBGET integrated database retrieval system