Bordetella pertussis Tohama I: BP1262
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Entry
BP1262 CDS
T00139
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bpe
Bordetella pertussis Tohama I
Pathway
bpe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BP1262 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpe03021
]
BP1262 (rho)
03019 Messenger RNA biogenesis [BR:
bpe03019
]
BP1262 (rho)
Transcription machinery [BR:
bpe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BP1262 (rho)
Messenger RNA biogenesis [BR:
bpe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BP1262 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
NACHT
S1CSD-TOTE-2
ResIII
Phostensin_N
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
CAE41558
UniProt:
Q7VYP9
LinkDB
All DBs
Position
complement(1334252..1335508)
Genome browser
AA seq
418 aa
AA seq
DB search
MHLNELKALHVSQLLEMAAGLEIENANRLRKQELMFAIMKRRAKQGEQIFGDGVLEVLPD
GFGFLRSPDTSYLASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVN
GSPPEAIKHRIMFENLTPLHPNQVMRLERDIKSEENLTGRILDIFAPIGKGQRGLIVAPP
KSGKTVMMQHVAHAITTNYPDAVLIVLLVDERPEEVTEMQRTVRGEVVASTFDEPATRHV
QVAEMVIEKAKRLVEMKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNLEEGGSLTILGTALIETGSRMDEVIYEEFKGTGNSEVHLERRLAEKRVYPSINL
NKSGTRREELLIKPELLQKVWVLRKFIHDMDEIQSMEFILDKMRATKTNAEFFDMMKK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcaatgaactgaaggcgctgcacgtgtcgcagttgctggaaatggccgccggc
ctggaaatcgagaacgccaaccgcctgcgcaagcaggagttgatgttcgccatcatgaag
cggcgcgccaagcaaggcgaacagatcttcggcgacggcgtgctggaagtcctgcccgac
ggcttcggattcctgcgctcgccggacacctcgtacctggccagcaccgacgacatctac
atctcgccgtcgcagatccgccgcttcaacctgcacaccggcgactccatcgagggcgaa
gtacgcaccccgaaggatggcgagcgctatttcgcgctggtcaaggtggacaaggtcaac
ggctcgccccctgaagcgatcaagcatcgcatcatgttcgagaacctgacgccgctgcac
cccaaccaggtgatgcgtctggaacgcgacatcaagagcgaggaaaacctcaccggccgc
atcctcgacatcttcgcccccatcggcaagggccagcgcggcctgatcgtggcgccgccc
aagtccggcaagacggtgatgatgcagcacgtggcccacgccatcaccaccaattatccg
gatgcggtgctcatcgtcctgctggtcgacgaacgccccgaggaagtgaccgaaatgcag
cgcaccgtgcgcggcgaagtggtggcctcgaccttcgacgaaccggccacccgccacgtg
caggtcgccgaaatggtcatcgagaaggccaagcgcctggtcgagatgaaaaaggacgtg
gtcatcctgctggactcgatcacccgcctggcccgcgcctacaacaccgtggtgccggcc
tccggcaaggtgctgaccggcggcgtggacgccaacgccctgcagcgccccaagcgcttc
ttcggcgcggcgcgcaacctcgaggaaggcggctcgctgaccatcctgggtaccgccctg
atcgaaacgggcagccggatggacgaagtcatctacgaagaattcaagggcaccggcaac
tccgaagtgcacctggagcgccgcctggccgaaaagcgcgtctacccgtccatcaacctg
aacaagtcgggcacccgccgcgaagagctgctgatcaagcccgaactgctgcagaaggtg
tgggtgctgcgcaagttcatccacgacatggacgaaatccagtcgatggaattcatcctc
gacaagatgcgcgccaccaagaccaacgccgaattcttcgacatgatgaagaaataa
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integrated database retrieval system
