Bordetella pertussis Tohama I: BP1796
Help
Entry
BP1796 CDS
T00139
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bpe
Bordetella pertussis Tohama I
Pathway
bpe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BP1796 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpe03400
]
BP1796 (uvrB)
DNA repair and recombination proteins [BR:
bpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BP1796 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BP1796 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Kinesin
DUF87
AAA_22
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
CAE42082
UniProt:
Q7VXH4
LinkDB
All DBs
Position
1886201..1888237
Genome browser
AA seq
678 aa
AA seq
DB search
MTAPGFVEFPDSPFHLYQPYPPAGDQPGAIDALTEGVSDGLMFQTLLGVTGSGKTYTMAN
MIARLGRPALVLAPNKTLAAQLYAEMREFFPRNAVEYFVSYYDYYQPEAYVPTRDLFIEK
DSSINEHIEQMRLSATKSLLERRDTVIVGTVSCIYGIGNPGDYHAMVLILRTGDRISRRE
VLARLVAMQYTRNDADFTRGVFRVRCETIDIFPAESPELALRLTLFDDEIESLELFDPLT
GRVRQKLPRFTVYPGSHYVTPRETVLRAIETIKEELRERLAQLIADGKLVEAQRLEQRTR
FDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPADALMFIDESHVTIGQLGGMY
RGDRSRKETLVQYGFRLPSALDNRPLRLEEFEARMRQCVFVSATPAAYEQEHADNVVEQV
VRPTGLVDPIVEVRPAHTQVDDLLGEIHKRAALQERVLVTTLTKRMAEDLTDFLSEHGVR
VRYLHSDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSE
RSLIQTIGRAARNLNGRAILYADRITDSMRRAIDETERRRAKQIQHNTDHGITARGVSKA
VRELIDGVVAPAGHDALESAVPAEVLTDEKAMAREIRRLEKLMMDHARNLEFEQAAAARD
ALNALKSRLLLDGVGWSG
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctcctggattcgtcgaattccccgatagcccgtttcacctctatcagccgtac
cctcccgcgggcgaccagccgggagcgatcgacgcgttgaccgagggcgtctcggacggc
ctgatgttccagacgctgctgggcgtgacgggctcgggcaagacctacaccatggccaac
atgatcgcccgcctgggccgtccggccctggtgcttgcgcccaacaagaccctggccgcc
cagctgtacgccgaaatgcgcgaattcttcccccgcaacgcggtggagtatttcgtgtcg
tactacgactattaccagcccgaagcctacgtgccgacccgcgacctcttcatcgagaag
gattcgtcgatcaacgagcacatcgagcagatgcgcctgtcggccaccaagagcctgctg
gagcgccgcgatacggtcatcgtgggcaccgtctcgtgcatctacggtatcggcaatccg
ggcgactaccatgccatggtcctgatcctgcgcaccggcgaccggatttcccggcgcgag
gtgctggcgcggctggtggccatgcagtacacccgcaacgacgcggacttcacgcgcggc
gtcttccgggtgcgctgcgagaccatcgacatcttcccggcggaaagccccgagctcgcg
ctgcgcctgacgctgttcgacgacgaaatcgagtcgctggagctgttcgatcccctgacc
gggcgcgtgaggcagaagctgccgcgctttacggtatacccgggctcgcactacgtgacg
ccgcgcgaaaccgtgctgcgcgcgatcgagaccatcaaggaagaactgcgcgagcggctg
gcccagctgatcgccgacggcaagctggtggaggcgcagcggctcgaacagcgcacccgc
ttcgatctggaaatgctgcaggagctgggcttttgcaagggcatcgagaactattcgcgg
cacttgtccggcgcggcgccgggcgagccgccgcccaccctgatcgattacctgccggcc
gacgcgctgatgttcatcgacgaaagccacgtcaccatcgggcagctcggcggcatgtac
cgtggcgaccgttcgcgcaaggaaaccctggtgcagtatggcttccggctgccgtcggcg
ctggacaaccggcccctgcgcctggaggagttcgaggcgcgcatgcgccagtgcgtgttc
gtgtcggccacgccggccgcctacgagcaggagcacgccgataacgtggtcgagcaggtg
gtgcggccgaccgggctggtcgatccgatcgtcgaggtgcgtccggcgcacacccaggtc
gacgacctgctgggcgagatccacaagcgggcggcgctgcaggagcgcgtgctggtcacg
acgctgaccaagcgcatggccgaggacctgaccgacttcctgtccgagcacggagtgcgg
gtgcgctacctgcattcggacatcgataccgtcgaacgggtggaaatcatccgcgacctg
cggctgggcgtcttcgacgtgctggtgggcatcaacctgctgcgcgagggcctggatatc
cccgaggtgtcgctggtggccatcctggatgccgacaaggaaggcttcctgcgatccgag
cgcagcctgatacagacgataggccgggccgcccgcaacctgaatggccgggccattctc
tacgccgaccgcataaccgactcgatgcggcgtgccatcgacgagaccgagcggcgcagg
gccaagcagatccagcacaacaccgaccacggcatcaccgcgcgcggggtcagcaaggcc
gtgcgcgaactgatcgatggggtggtggcgccggccggccatgacgcgctggaatccgcc
gtgcccgccgaggtgctgaccgacgagaaagccatggcgcgcgagatccggcgcctggaa
aagctgatgatggatcacgcccgcaacctggaattcgagcaggccgccgcggcacgcgat
gcgctcaacgctctcaagagtcggttgctgcttgatggcgtaggttggtctggttaa
DBGET
integrated database retrieval system
