Bordetella pertussis Tohama I: BP1942
Help
Entry
BP1942 CDS
T00139
Symbol
hmsR
Name
(GenBank) putative glycosyl transferase
KO
K11936
poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
Organism
bpe
Bordetella pertussis Tohama I
Pathway
bpe00543
Exopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
bpe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00543 Exopolysaccharide biosynthesis
BP1942 (hmsR)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bpe01003
]
BP1942 (hmsR)
Glycosyltransferases [BR:
bpe01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
BP1942 (hmsR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_tranf_2_3
Glycos_transf_2
Glyco_trans_2_3
Glyco_transf_21
Chitin_synth_2
Glyco_tranf_2_2
Chitin_synth_1
Motif
Other DBs
NCBI-ProteinID:
CAE42224
UniProt:
Q7VX65
LinkDB
All DBs
Position
complement(2042603..2043862)
Genome browser
AA seq
419 aa
AA seq
DB search
MNDSVKSVLSSFVFYYPFFMSYFWIVGGLLHFFLFEQGRKHRATLLPRVPRVAIVVPCYN
EGENVAEVIAHLDRMHYPNYRIIAVNDGSRDNTGALLNELAEQYPRLLVVHQSRNEGKAI
GLNTAAQLSDAEFLLCIDGDSLPHPDSITYMLTHFLHAGHVGAVTGNPRIRNRSTVLGRM
QVGEFSSIVGLIKRTQQLYGKLMTVSGVMTMFRKQALHQVGYWSPDMQTEDIDISWKLQL
AGWTLRYEPRALTWILMPETFRGLFKQRYRWARGGIETALKYAPRMLNPRQILMWPIFLE
FSLSVLWAYAMLFLICMAVLGQFVALPPAWQFEIFPRWHGTLLFLTCLAQLFAGCIVDRA
YDYRIFRYFADAVWYPIAFWIIGMITTVFALPRVLFRRAQSRARWVSPDRGIKHESVDH
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaacgactccgtcaagagcgtgctgtccagtttcgttttctattacccgttcttcatg
tcgtatttctggatcgtgggcgggctgctgcatttcttcctgttcgagcagggacgcaag
caccgcgccacgctgctgccgcgggtgccgcgcgtggccatcgtggtgccctgctacaac
gagggcgagaacgtggccgaggtgatcgcgcacctggaccgcatgcactacccgaactat
cgcatcatcgccgtcaacgacggcagccgcgacaataccggcgcgctgctcaacgagctg
gccgagcagtatccgcgcctgctggtggtgcaccagagccgcaacgagggcaaggccatc
ggcctgaacacggccgcgcagctcagcgacgccgagttcctgctgtgcatcgacggggac
tcgctgccccaccccgactcgatcacctacatgctgacgcatttcctgcacgccgggcac
gtcggcgcggtcaccggcaacccgcgcatccgcaaccgctcgacggtgctgggccgcatg
caggtgggcgaattctcgtccatcgtggggctgatcaagcgcacccagcagctctacggc
aagctgatgaccgtctccggcgtcatgaccatgttccgcaagcaggcgctgcaccaggtc
ggctactggagccccgacatgcagaccgaggacatcgatatcagctggaagctgcagctg
gccggctggaccctgcgctacgaaccgcgcgcgctgacctggatcctgatgcccgagacg
ttccgcgggctgttcaagcagcgctaccgctgggcgcgcggcggcatcgagaccgcgctg
aagtacgccccgcgcatgctcaacccgcgccagatcctgatgtggccgatcttcctggag
ttcagcctgagcgtgctatgggcctacgccatgctgttcctgatctgcatggctgtgctg
ggccagttcgtcgcgctgccgcccgcctggcagttcgagatattcccgcgctggcacggc
acgctgctgttcctgacctgcctggcgcagctgttcgccggctgcatcgtcgaccgcgcc
tacgattaccgcatcttccgctacttcgccgacgccgtctggtatccgatcgcgttctgg
atcatcggcatgatcaccaccgtcttcgcgctgccgcgcgtcctgtttcgccgagcccaa
agccgggcgcggtgggtaagccccgaccgaggaatcaaacatgaaagcgttgatcattga
DBGET
integrated database retrieval system
