Bordetella pertussis Tohama I: BP1943
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Entry
BP1943 CDS
T00139
Symbol
hmsF
Name
(GenBank) putative hemin storage protein
KO
K11931
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
Organism
bpe
Bordetella pertussis Tohama I
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GHL13
Polysacc_deac_1
GHL10
Motif
Other DBs
NCBI-ProteinID:
CAE42225
UniProt:
Q7VX64
LinkDB
All DBs
Position
complement(2043866..2045971)
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AA seq
701 aa
AA seq
DB search
MTAMHRTLLKWFACCALGLLMLPARAYKVDMLPPPDPDDGLTFRVLCMHDVRDNLRASFA
DMPDQFAIETRTLTDLFEWIRVKGFNLISMQQIIDSRAGVRPLPPRPILLTFDDGYASTY
TKVFPLLKKFNYPAVVAVVTSWTDAPAGTKIRLSPKIEVPHDFFMTWAQLREMAQSGLVE
LASHSHNLHRGVLANPQGNEQPAASSRQYLPASGRYENDAEYRARVRQDLKTSADLIREH
TGVTIRSIVWPYGAHNRDTDQVAAEVGLNIGLTLQPGPNTPDVSLTQIRRSLVDYEVNVA
TVARAMREPVSYHGQVRPIERIVQVDLDYIYDPDPEQQNRNLGQLIDRMKDLAPSAVYLQ
AFAYPKGDGDITEVYFPNRHLPMRADLFNRVAWQLKTRAGVMVYAWLPVLTFSVPPGNPA
YGKVVQSTTRKPGERGLGSPTRLSPFHPDAHRVISEIYEDLAKAAHFDGLLFHDDAVLDD
TEDSSPEALATYQGWGLPPDIAAIRADPKLAQQWSKGKIRYLIDFTMHLRHIVSGYQNDR
DMVVARNLYAQPVLDPVSEAWYGQSLPEFLKSYDFVALMAMPNMEGAARPEQWMRQLVAA
VARQKGLDRTIFELQARDWRVGKPIDTEILRKQMVQLRSLGAINYGYYPDDFIANHPDAE
VLRDVMSLKSTLEKRRLTKAQELSRQTTLYGSASQAEPTQR
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccatgcatcggaccctgctgaaatggtttgcctgctgcgcgctggggctgctg
atgctgcccgcgcgcgcttacaaggtggacatgctcccgccccccgatcccgacgacggc
ctgacattccgggtgctgtgcatgcacgacgtgcgcgacaacctgcgcgcctcgtttgcc
gacatgcccgatcagttcgccatcgagacgcgcacgctgaccgatctgttcgagtggata
cgcgtgaagggattcaacctcatcagcatgcaacagatcatcgattcgcgcgccggcgtg
cgcccgctgccgccgcgccccatcctgctgaccttcgacgacggctacgccagcacctac
accaaggtgtttcccttgctgaagaaattcaactatcccgcggtggtcgccgtcgtcacc
agctggaccgacgcgccggccggcaccaagatccgcctcagccccaagatcgaagtgccg
cacgacttcttcatgacctgggcgcagctgcgcgaaatggcgcagtccggcctggtcgag
ctggcctcccactcgcacaacctgcaccgcggcgtgctggccaacccgcagggcaacgaa
cagcccgcggcgtcctcgcgccagtacctgccggccagcgggcgctacgagaacgacgcc
gaatatcgcgcccgcgtgcgccaggatctcaagaccagcgccgacctgatccgcgaacac
accggcgtgaccatccgctccatcgtctggccctacggcgcgcacaatcgcgacaccgac
caggtggccgccgaggtgggcctgaacatcggcctgacgctgcagcccggccccaacacc
cccgacgtttcgctgacgcagatccgccgcagcctggtggactacgaggtcaacgtcgcc
acggtcgcccgcgccatgcgcgagccggtcagctaccacggccaggtccgcccgatcgag
cgcatcgtgcaggtcgacctggactacatctacgaccccgaccccgagcagcagaaccgc
aacctcggccagctgatcgaccgcatgaaggacctggcgcccagcgccgtctacctgcag
gccttcgcctatcccaagggcgacggcgacatcaccgaggtgtacttccccaaccgccat
ctgccgatgcgcgccgatctgttcaaccgcgtggcctggcagctgaagacccgcgccggc
gtgatggtgtacgcctggctgcccgtgctgaccttctcggtgccgcccggcaacccggcc
tatggcaaggtggtgcagtcgacgacccgcaagcccggcgagcgcggcctgggcagcccg
acccggctcagccctttccatcccgacgcccaccgcgtcatcagcgagatctacgaagac
ctggccaaggcggcccacttcgacggcctgctgttccacgacgacgccgtgctcgacgac
accgaggacagcagccccgaggcgctggccacctaccagggctggggcctgccgcccgat
atcgcggcgatacgcgccgaccccaagctggcccagcaatggtccaagggcaagatccgc
tacctgatcgacttcacgatgcacctgcgccatatcgtgtccggctaccagaacgaccgc
gacatggtggtggcgcgcaatctctacgcccagccggtgctcgatcccgtgtcggaggcc
tggtacggccagagcctgccggaattcctcaagagctacgatttcgtggcgctgatggcc
atgcccaacatggagggcgccgcgcggcccgagcaatggatgcgccagctggtggccgcc
gtggcgcgccagaagggcctggaccgcaccatcttcgagctgcaggcgcgcgactggcgc
gtgggcaagccgatcgacaccgagatactgcgcaagcagatggtgcaattgcgcagcctg
ggcgccatcaactatggctactacccggacgatttcatcgccaaccaccctgacgccgaa
gtgctgcgcgacgtgatgtcgctgaagtcgacgctggaaaagcgccgcctgaccaaggcc
caggaactatcgcgccagaccacgctgtacggcagtgcgtcgcaggccgagccgacgcag
aggtag
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