Bordetella pertussis Tohama I: BP2158
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Entry
BP2158 CDS
T00139
Name
(GenBank) putative sigma-54-dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bpe
Bordetella pertussis Tohama I
Brite
KEGG Orthology (KO) [BR:
bpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpe03000
]
BP2158
Transcription factors [BR:
bpe03000
]
Prokaryotic type
Helix-turn-helix
Other families
BP2158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
AAA_lid_14
HTH_8
Sigma54_activ_2
HTH_30
AAA_5
PAS_8
HTH_29
PAS
HTH_28
HTH_23
HTH_1
nSTAND3
PAS_4
Motif
Other DBs
NCBI-ProteinID:
CAE42436
UniProt:
Q7VWP5
LinkDB
All DBs
Position
2279199..2281064
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AA seq
621 aa
AA seq
DB search
MPGYQLSASGQHLPSTQAAAPIVRSWERCASAAADLHDDPVALRHGDLQERLEQHACVLR
AAQPEIETLAGMVASASSLVLLADASGVILQASGNTGFLQRADHVALRPGVSWAENHRGT
NAIGTALIEAAALRVHGAEHFLRRNQILSCHAAPIRSPRGEILGVLDISGDAGRMHAYAL
SLASMCARQVANRVIEQAGERCLYLVFHKQASLLDSVERGLLLIEDERIVGANDAAVALL
GATWPALLDQPLDGWLVDWRAVARTPGRVHTPQGAPFHAVLRQGGHARSLPAPPRPPRAM
PAQAPEETLPALAPALQAGFERARRALDGGLSVLLQGETGAGKEVYAQHLYRRSIWRDGP
FVAVNCGALPESLIEAELFGYEPGAYTGARRLGARGRLREADGGVLFLDEIGDMPLALQT
RLLRALQERMVQPLGADKAVPVNFGLVSATHRDLDAMIAAGEFRADLYYRLHDYAVPLPR
LRERDDLRPFICAALRALDDTPAGLTLADDALDALAAYAWPGNYRQLRSVLRTLALFHPP
GSLIHRHHLPAAIAAPAVHAADGAAPPPSVVAPPAAATLRDAGLHRIDQALARHGGNIAG
AAHELGIHRSTLYRHLARQRG
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcccggctaccagctttccgcatccggccagcacctgccgtccacgcaggccgccgct
cccatcgtgcgctcctgggagcgctgcgccagcgccgccgccgacctgcacgacgacccc
gtcgccctgcgccacggcgacctgcaggaacgcctcgagcagcacgcctgcgtgctgcgc
gccgcccagcccgaaatcgaaaccctggccggcatggtggccagcgcctccagcctggtg
ctgctggccgacgccagcggcgtgatcctgcaggcaagcggcaataccgggttcctgcag
cgcgccgaccacgtggcgctgcggcccggggtcagctgggccgaaaaccatcgcggcacc
aacgccatcggcacggcgctgatcgaagccgccgcgctgcgcgtgcacggcgccgaacac
ttcctgcggcgcaaccagatcctcagctgccacgcggcgccgatccgttcgccgcgcggc
gagatcctcggcgtgctggatatctcgggcgacgccgggcgcatgcacgcctatgcgctg
agcctggccagcatgtgcgcgcgccaggttgccaaccgcgtcatcgagcaggccggcgag
cgctgcctgtacctggtcttccacaagcaggcctcgctgctcgattcggtcgaacgtggg
ctgctgctgatcgaggacgaacgcatcgtcggcgccaacgatgccgccgtcgcgctgctg
ggcgccacctggcccgcgctgctggaccagccgctggacggctggctggtcgattggcgc
gccgtcgcgcgcacgcccggccgcgtccatacgccgcaaggcgcacccttccatgccgtg
ctgcgccagggcgggcatgcgcgctcgctgcccgcgccgccgcgcccgccgcgcgccatg
ccggcacaggcgcccgaggaaacgctgccggcgctggcgccggcgctgcaggccggcttc
gaacgcgcccggcgcgcgctcgacggcggcctgtcggtgctgctgcaaggcgaaaccggc
gccggcaaggaagtctacgcacagcacctgtaccgccgcagcatctggcgcgacggtcca
ttcgtcgccgtcaattgcggcgccctgcccgaaagcctgatcgaggccgaactgttcggc
tacgagccgggcgcctataccggcgcgcggcggctgggcgcgcgcggccggctgcgcgaa
gccgacggcggcgtgctgttcctggacgaaatcggcgacatgccgctggccctgcagacc
cgcctgctgcgcgccctgcaggagcgcatggtgcagccgctgggcgccgacaaggcggtg
ccggtcaacttcggcctggtcagcgccacccaccgcgacctggacgccatgatcgccgcc
ggcgagttccgcgccgacctctattaccgcctgcacgactatgcggtccccttgccgcgg
ctgcgcgagcgcgacgatctgcgcccctttatctgcgccgccttgcgcgcgctggacgac
acgcccgccggcctgacgctggccgacgacgccctcgacgcgctggccgcctatgcgtgg
ccgggcaactaccggcagctgcgctcggtgctgcgcacgctggcgctgttccatccgccc
ggcagcctgatccatcgccaccacctgcccgccgccatcgccgcgcccgccgtccacgcg
gccgacggcgccgcgccgcccccgagcgtggtggccccgcccgcggccgccacgctgcgc
gacgccggcctgcaccggatcgaccaggccctggcccgccacggcggcaatatcgccggg
gccgcgcacgaactcggcatccatcgcagcacgctgtaccgccacctggcgcgccagcgc
ggctag
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