Bordetella pertussis Tohama I: BP2687
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Entry
BP2687 CDS
T00139
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bpe
Bordetella pertussis Tohama I
Pathway
bpe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bpe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BP2687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpe03019
]
BP2687
03009 Ribosome biogenesis [BR:
bpe03009
]
BP2687
Messenger RNA biogenesis [BR:
bpe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BP2687
Ribosome biogenesis [BR:
bpe03009
]
Eukaryotic type
Pre-60S particles
RNases
BP2687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CAE42963
UniProt:
Q7VVH7
LinkDB
All DBs
Position
complement(2851361..2851906)
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AA seq
181 aa
AA seq
DB search
MAANENRLVWLDMEMTGLDPEKERIIEVAVVVTEADLTVVAEGPVLVVHQPDSLLDAMDN
WNKSTHGKSGLIEKVKASTLGEAQAEQILLEFLAEHVPAGKSPLCGNTISQDRRFMYAYM
PNLERFFHYRNLDVSTLKELARRWAPAVYKGFDKKSRHEALADIYESIDELKYYREHLLK
V
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaacgaaaaccgcctggtctggctcgatatggaaatgaccgggctcgatccc
gagaaagagcgcatcatcgaggtggcggtggtcgtgaccgaggccgatctcaccgtggtg
gccgaaggcccggtgctggtggtgcaccagcccgacagcctgctcgacgccatggacaac
tggaacaagtccacccatggcaagagcggcctgatcgagaaggtcaaggcatcgacgctg
ggcgaggcccaggccgagcagatcctgctcgaattcctggccgagcacgtgcccgcgggc
aagtcgccgctgtgtggcaataccatcagccaggaccggcgcttcatgtacgcctacatg
cccaacctggagcgcttcttccattaccgcaacctggatgtcagcaccctgaaggagctg
gcgcggcgctgggcgcccgcggtctacaagggattcgacaagaaaagccgccacgaggcg
ctggccgacatctacgaatccatcgacgaactcaagtattaccgcgagcacctgctcaag
gtctga
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