Bordetella pertussis Tohama I: BP3025
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Entry
BP3025 CDS
T00139
Symbol
murD
Name
(GenBank) putative peptidoglycan synthesis protein
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
bpe
Bordetella pertussis Tohama I
Pathway
bpe00470
D-Amino acid metabolism
bpe00550
Peptidoglycan biosynthesis
bpe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bpe00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BP3025 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BP3025 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bpe01011
]
BP3025 (murD)
Enzymes [BR:
bpe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BP3025 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bpe01011
]
Precursor biosynthesis
Amino acid ligase
BP3025 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
CAE43296
UniProt:
Q7VUQ1
LinkDB
All DBs
Position
complement(3217779..3219311)
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AA seq
510 aa
AA seq
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MNTTETSRAAAPLVLILGLGETGVAAARWYARQGSPLRVTDSRAQPGGLAALQAALADAT
VEYRLGCGEQFPPDLLDGVAQIVLSPGLVPHESPTRELLEQARERNVEVVGEIELFARAL
AGLAESREYRPRVLAITGTNGKTTVTALTRQLIEAGGMSARAAGNISPAALAALMDALDQ
DDLPQVWVLELSSFQLETTRTLAPDAAVVLNVTQDHLDWHGDMQAYAQAKARILKPARLA
IVNRDDPLAVAMVESLQALNVRSFGRDVPALVGDMGLELGQGVAWLTACESNDFDEPAPA
PRRKKDAPPPTRAGGRMSRLMPVDALRIRGVHNALNALAAMQLARSLDLGWGPMLRTLRD
YAGEPHRAELVRSIGDVDYINDSKGTNVGATVAALEGLGQQVVLIAGGQGKGQDFSPLVP
VVRRHARAVVLIGVDGAAIGKVLEPTGVPCAAAADMREAVRRAAELAQPGDAVLLSPACA
SFDMFRNYPHRGEVFAAEVRELALDRGEVA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgactgaaacctcccgtgccgccgcaccgcttgtcctgatcctcggattgggc
gagacgggcgtggccgccgcgcgctggtacgcccgccagggttcgcccctgcgcgtgacg
gactcgcgcgcgcaaccgggagggctggccgcgctgcaagcggcgctggccgatgccacg
gtcgaataccggctgggctgcggcgagcagttccccccggacctgctcgacggtgtggcg
cagatcgtgctgagcccgggattggtgccgcacgagtcgcctacccgcgaactgctggag
caggcccgtgagcgcaacgtggaagtggtgggcgagatcgagctgttcgcccgcgcgctg
gccggcctggccgaatcccgagagtatcgtccgcgcgtgctggcgatcactggcaccaat
ggcaagaccaccgtcaccgcgctgacccggcagctgatcgaggcaggcgggatgagcgcg
cgcgcggccggcaatatcagccccgccgcgctggccgcgctgatggatgcgctggaccag
gatgatctgcctcaggtgtgggtgctggaactctccagcttccagctggaaaccacgcgg
acgctggcgcccgacgccgcggtcgtgctgaacgtgacccaggaccacctcgactggcat
ggcgacatgcaggcctatgcgcaagccaaggcccgcatcctcaagccggcgcgcctggcc
atcgtcaaccgcgacgatccgttggcggtcgccatggtcgagagcctgcaagccttgaat
gtacgcagcttcggccgcgacgtgcccgccctggtcggtgacatgggcctggagctgggt
cagggcgttgcgtggctgaccgcctgcgaatccaacgatttcgacgagccggcgccggcg
ccgcgacgcaagaaggacgcgccgccgcccacccgcgccggtggccgcatgagccgcctg
atgccggtggatgccctgcgcatccgtggcgtgcacaatgccctcaatgccctggccgcg
atgcagctggcccgctcgctcgacctgggctggggcccgatgctgcgcaccctgcgcgac
tatgccggcgagccgcatcgcgccgaactggtgcgctcgatcggcgatgtcgactacatc
aatgacagcaagggcaccaacgtgggcgccaccgtggccgccctggaaggcctgggccag
caggtcgtgctgatcgctggcggacagggcaagggccaggatttctcgccgctggtgccg
gtggtgcgccgccacgcgcgcgccgtggtgctgatcggcgtcgacggggcggctatcggc
aaggtgctcgagcccaccggcgttccctgcgcggccgctgccgacatgcgcgaggccgtg
cgccgcgccgccgagctggcgcagcccggcgatgccgtgctgttgtcgccggcctgcgcc
agcttcgacatgttccgcaattacccgcaccgtggcgaagtattcgccgcggaggtgcgg
gaactcgcgctcgaccggggagaggtggcatga
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