Bordetella pertussis Tohama I: BP3214
Help
Entry
BP3214 CDS
T00139
Name
(GenBank) putative membrane-bound lytic murein transglycosylase D precursor
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
bpe
Bordetella pertussis Tohama I
Brite
KEGG Orthology (KO) [BR:
bpe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bpe01011
]
BP3214
Enzymes [BR:
bpe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
BP3214
Peptidoglycan biosynthesis and degradation proteins [BR:
bpe01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
BP3214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
HTH_28
HTH_23
Motif
Other DBs
NCBI-ProteinID:
CAE43480
UniProt:
Q7VUA4
LinkDB
All DBs
Position
3425413..3426822
Genome browser
AA seq
469 aa
AA seq
DB search
MRFLRLLLPLFLAVLAGCAGTAKQNQAAGPSSNRYIAQDTSRTVDLTSPPSDAWDRIRRG
FAIPNLNTDLAQEWTDYYASHPESVQRMAERAGKYLYFIVDEINRRGLPTELALLPFVES
AYNPTALSRSQASGLWQFIPTTGQHFNLKQDWWRDERRDPIASTYAALDYLEKLFEMQGD
WYLALASYNWGEGSVQRAMAKNEAAGLSTDYLSLNMPDETRNYVPKLQAIKNIIANPRKF
AVVLPPVENTPYFVAVQKNRDIDIELAARLAEMPLDEFKALNPAFNRPLIRGEHAPTLLL
PADRADRFNANLQNYKGDLSSWKVYHTRRGESYAAIAKRFGISEAKLRASNDIGSKRKVA
ADQALLIPGVPSGDGAANIQLASLSPPVGALDNVGEPRAAAAPRGKAPARVASARPNVRT
HKVSSGDTLFGLARKYGTSVGALRALNNLKGNNLKLGSQLRIPGTGTRG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagatttctccgcctcctgctacccctgttcctcgccgtacttgccggctgcgccggc
accgcaaaacagaaccaggccgccggtccctccagcaaccgctacatcgcccaagacacc
tcccgcaccgtcgatctcaccagcccccccagcgacgcctgggaccgcatccgccgcggc
ttcgccatccccaacctgaacaccgacctggcccaggagtggaccgactactacgcgtcg
caccccgagtcggtgcagcgcatggccgagcgggccggcaagtacctgtacttcatcgtc
gacgaaatcaaccgccgcggcctgcccaccgagctggcgctgctgcccttcgtcgaaagc
gcctacaaccccaccgccctgtcgcgctcgcaagcctcgggcctgtggcagttcattccc
accaccggccagcatttcaacctcaagcaagactggtggcgcgacgagcgccgcgacccg
atcgcctcgacctacgccgcgctcgactacctggaaaagctgttcgagatgcagggcgac
tggtacctggcgctggcctcgtacaactggggcgagggctcggtgcaacgcgccatggcc
aagaacgaggcggccggcctgagcaccgactacctgtcgctgaacatgcccgacgagacc
cgcaactacgtgcccaagctgcaggccatcaagaacatcatcgccaacccgcgcaagttc
gcggtggtattgccgccggtcgagaacaccccgtatttcgtcgcggtgcagaagaaccgc
gacatcgacatcgagctggcggccaggctggccgaaatgccgctggacgaattcaaggcg
ctcaaccccgcgttcaaccgtcccctgatccgcggcgagcatgcccccaccctgctgctg
ccggccgaccgggccgaccgcttcaacgccaacctgcagaactacaagggcgacctcagt
tcctggaaggtctaccatacgcgccgcggcgaaagctatgccgccatcgccaagcgcttc
ggcatcagcgaggccaagctgcgcgccagcaacgacatcggctcgaaacggaaggtggcc
gccgaccaggcgctgctgatcccgggcgtgcccagcggagacggcgccgccaatatccag
ctggcgtcgctgtcgccgccggtgggcgcgctggacaacgtgggcgaaccgcgcgccgct
gcggcgccgcgcggcaaggcgccggcgcgcgtggccagcgcgcgccccaacgtgcgcacc
cacaaggtcagctcgggcgacaccctgttcggcctggcgcgcaaatacggcacctcggtc
ggtgcgctgcgcgccctgaacaacctcaagggcaacaacctgaagctgggctcgcaattg
cgcatcccgggcaccggcacgcgcggctga
DBGET
integrated database retrieval system
