Bordetella pertussis Tohama I: BP3292
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Entry
BP3292 CDS
T00139
Name
(GenBank) putative primosomal protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bpe
Bordetella pertussis Tohama I
Pathway
bpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BP3292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpe03400
]
BP3292
Enzymes [BR:
bpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BP3292
DNA repair and recombination proteins [BR:
bpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BP3292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_25
Zn_ribbon_6
AAA_16
nSTAND_NTPase5
HypA
zf-IS66
Motif
Other DBs
NCBI-ProteinID:
CAE43557
UniProt:
Q7VU40
LinkDB
All DBs
Position
3508470..3510512
Genome browser
AA seq
680 aa
AA seq
DB search
MRVALDVPLPGPFDYRSAAPLPLGARVIVPFGRRKLVGVVVEHPGQPSIDPAQVREVEQP
LEDLPPMPADWMRLARFAADYYQRPLGEVMLPVLPPPLRKPSAYQGKRSGLGPVARLDAR
KPRAAAAVAAEPDQAPELNEAQREAVDTIGALSAFQPVLLHGVTGSGKTEVYLHAAARVL
QAGRQVLLMVPEINLTPQLEGALRARLEALVGPQGVAILHSGLADGERVQAWARAQRGQA
RLLLGTRMSIFAPLPELGLIVVDEEHDPSYKQQEGLRYSARDLAIWRARDLDIPVVLGSA
TPSLESWQHAERGRYLRLTLPGRARASSLPEIRLIDTRRLQLKQGLSPQFIEAIGQRLER
GEQSLVFLNRRGYAPVLHCASCAWVSHCPRCSTFTVLHRGPGAGGYRLQCHHCGYQAPVP
RACPECGDQDLEPMGRGTQRIEEQLAEWFPQARIARIDADSTRRKGSAQALFAAVHAGEV
DIMVGTQMVAKGHDFARLGLVGVLNADSMLFAHDFRAPERLFAQLMQVAGRAGRHAAGAQ
VLIQTGYPEQPVYQALLRHDYAGFARHALQEREDTGLPPFAYQALLTAEARELTVAQGFL
QRARDLATGEPWPGVDAITLYDPVPLRVVRVAHVERAQLLIESTSRPALQGFLTAWAACL
PQLAVEARVRWQLEVDPLEI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgttgcgctggacgtcccgttgccggggccgttcgattaccgcagcgcagcgcca
ttgccgctgggcgcgcgcgtgatcgtgccgttcgggcggcgcaagctggtcggggtggtg
gtcgaacatcccggccagccgtccatcgacccggcgcaggtgcgcgaggtcgagcagccg
ctcgaagacctgccgccgatgccggccgactggatgcggctggcgcgctttgcggccgat
tactaccagcggccgctgggcgaggtcatgctgccggtgctgccgccgccgctgcgcaaa
ccgtcggcttaccagggcaagcgctccggcctgggacccgtggcgcgcctggacgcgcgc
aagccgcgcgccgcggcagcggtggcggccgagccggaccaggcgcccgaactgaatgaa
gcgcaacgcgaggcggtcgacaccatcggcgcgctgtcggcgtttcagccggtcctgctg
cacggcgtgaccggcagcggcaagaccgaggtgtacctgcatgcggcggcgcgcgtcttg
caggccgggcggcaggtcctgctgatggtgcccgagatcaacctgacgccgcagctcgaa
ggcgccttgcgtgcacgcctggaggcgctggtcgggccgcagggcgtggccatcctgcac
agcgggctggccgatggcgagcgcgtgcaggcgtgggcgcgcgcgcagcgcggccaggcc
cgcctgctgctgggcacccgcatgtcgatttttgcgcccctgccggaactgggcctgatc
gtggtcgacgaagagcacgatccttcctataagcagcaggaaggcctgcgctattccgcg
cgcgacctggccatctggcgcgcccgcgacctggatatcccggtggtgctgggttcggcc
acgccgtcgctggaaagctggcagcatgccgagcgcggccgctacctgcgcctgacgctg
cccggccgggcgcgcgccagcagcctgccggagatccgcctgatcgacacgcgccggctg
caactcaagcagggtctgtcgccgcagttcatcgaggcgatcggccagcggctcgaacgc
ggcgagcagtcgctggtgttcctcaaccggcgcggctacgcgcccgtgctgcattgcgcg
tcgtgcgcatgggtcagccactgcccgcgctgctcgacgttcacggtgctgcaccgcggc
ccgggcgccggcggctatcgcctgcagtgccaccactgcggttaccaggcgccggtgccg
cgcgcctgcccggagtgcggcgaccaggacctcgagcccatgggacgcggcacgcagcgc
atcgaggagcaattggccgagtggtttccgcaggcgcgcatcgcgcgcatcgacgccgac
agcacgcgccgcaagggcagtgcgcaggcgctgttcgcggccgtgcatgccggcgaagtg
gacatcatggtcggcacgcagatggtggccaagggacacgacttcgcgcggctcggcctg
gtgggcgtgctcaacgccgactccatgctgttcgcgcacgacttccgcgcgcccgagcgc
ctgttcgcccaattgatgcaggtggccgggcgggcgggccgccatgccgccggcgcgcag
gtcctgatccagaccggctatcccgagcaaccggtctatcaggccctgttgcgccacgat
tacgccggctttgcgcgccacgccctgcaggagcgcgaagacaccgggctgcccccgttt
gcctatcaggctttgttgaccgccgaggcgcgcgaactgacggtggcgcagggctttctg
cagcgcgcgcgcgacctggccacgggcgagccatggcccggcgtggacgcgattacactc
tacgatcccgtgccgctgcgcgttgtgcgcgtggcccacgtcgagcgtgcccagctgctg
atagaaagcaccagccgccccgccctgcagggtttcctgacggcctgggcggcctgcctg
ccgcaactggccgtcgaggcgcgcgtacgctggcaactggaagtcgatccgctggagatc
tga
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