Bordetella pertussis Tohama I: BP3863
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Entry
BP3863 CDS
T00139
Symbol
trmE
Name
(GenBank) putative tRNA modification GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
bpe
Bordetella pertussis Tohama I
Brite
KEGG Orthology (KO) [BR:
bpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpe03016
]
BP3863 (trmE)
Transfer RNA biogenesis [BR:
bpe03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
BP3863 (trmE)
Prokaryotic type
Methyltransferases
BP3863 (trmE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
Ras
Roc
MMR_HSR1_Xtn
Arf
ABC_tran
AAA_16
MCM
Motif
Other DBs
NCBI-ProteinID:
CAE44118
UniProt:
Q7VSR5
LinkDB
All DBs
Position
4074171..4075523
Genome browser
AA seq
450 aa
AA seq
DB search
MSLYAPIAAIATAPGRGGIGVVRISGPDLAELAQRLFGRPLTPRHAHYLPFRAADGEVID
EGLAIYFRAPHSYTGEDVLELQGHGGPAVLRRILARCLQAGHDLGLRPAEPGEFTRRAFL
NERLDLAQAEAVADLIDASSEAAARGAMASLSGEFSQRVNDLSDRIIHLRMLVEATLDFP
EEEIDFLEKYQARPTLQALTHDLDTLIAQARQGVILREGLHVVLAGKPNVGKSSLLNALA
GDDIAIVTPIAGTTRDKVVQEIHIDGVPLHIVDTAGLRDTDDAVESIGIERTWKEIERAD
LILHLQDVTQPPDHLDAQIVRRLPARTPVLNVFNKVDLLDAAFQGQPDSLAISARGGIGL
DALRQHLLQLAGWNPGAESPWLARERHLHALQQAAQHLEIATEHAREDDRVLDLFAEELR
LAHEALTGITGKFTSDDLLGEIFSSFCIGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtacgcccccattgctgcaatcgccacggcccccggccgcgggggcatcggc
gtggtgcgcatatccgggcccgatctcgccgaacttgcacaacggctgttcgggcgtccg
ctgacgccgcgccacgcgcactacctgccgtttcgcgccgccgacggcgaggtgatcgac
gaagggctcgccatctacttccgtgctccgcactcctataccggcgaagacgtactggag
ctgcagggacatggcggccccgccgtgctgcgccgcatcctggcgcgctgcctgcaggcg
ggccacgacctcggactgcgtccggccgaacccggcgagttcacccgccgcgcctttctc
aacgagcgcctcgacctggctcaggccgaggccgtggccgacctcatcgacgcctcctcg
gaagccgccgcgcgcggcgccatggcgtcgctgtcgggcgagttctcgcagcgcgtcaac
gacctgtccgaccgcatcatccacctgcgcatgctggtggaagccaccctggactttccc
gaagaagaaatcgacttcctcgagaaataccaggcgcggcccacgctgcaggcgctcacg
cacgacctcgacacgctcattgcccaggcgcgccagggcgtgatcctgcgcgaaggcctg
cacgtcgtgctggccggcaaacccaatgtgggcaaatccagcctgctcaacgccctggcc
ggcgacgacatcgccatcgtcacgcccatcgcgggcaccacgcgcgacaaggtcgtgcag
gagatccacatcgatggcgtaccgctgcacatcgtcgacaccgccggcttgcgcgacacc
gacgacgccgtcgaaagcataggcatcgaacgcacctggaaagagatcgagcgcgccgac
ctcatcctgcacctgcaggacgtcacccagccgcccgatcacctcgacgcgcaaatcgtc
aggcgcctgcccgcgcgcacgccggtgctaaacgtcttcaacaaagtcgatctgctcgac
gcggcgttccagggccagcccgacagcctggccatctccgcgcgcggcggcatcggcctg
gacgcattgcgccagcacctgctgcaactggccggctggaaccccggcgccgaatcgcca
tggctggcgcgcgaacgccatctgcatgcgctgcaacaggccgcgcagcatctcgagatc
gccaccgaacacgcccgcgaggacgaccgcgtgctggacctgttcgccgaagagctgcgc
ctggcgcacgaagccctgaccggcatcaccggcaaattcaccagcgacgacttgctgggc
gagatcttttcgagtttctgcatcggcaagtag
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