Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110153090
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Entry
110153090 CDS
T05002
Symbol
cdc40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110153090 (cdc40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpec03041
]
110153090 (cdc40)
Spliceosome [BR:
bpec03041
]
Complex C
Other components
Step II factors
110153090 (cdc40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
110153090
NCBI-ProteinID:
XP_020772632
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MSAAIASLASYGSDSDSENESESNTTKEADDPDATAHLKPLQSAKTMALAVLNSAPEVAV
KESVETGVHLDPSMKEVTYNPSYETMFAPEFGPENPFRSQQMSAVRNMLSGYAEPAHVND
FMFEQQRRTFSTFGYALDPSVDTNQVSATSYIGAVEEAEKSKGVTVFESGHKKPEKRKKV
KGGDAGEIDNFLGPWAKYVDEKNVAKPTEDEKKYLEEYLAKRQKRGRVEEEAPAEEKTIL
HVKDMFDYQGRSYLHIPQDVGVNLRSTEPPEKCYLPKKQIHVWSGHTKGVSAIRLFPGSG
HLLLSSSMDCKIKLWEVYGERRCIRTFIGHSKAVRDICFNNAGTQFLSAGYDRYLKLWDS
ETGKCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRTEEVVQEYDRHLGAV
NTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM
DNQILIFGAQNRFRLNKKKVFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTK
LYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgccatcgcttccctcgcttcttacggcagcgattctgattctgaaaatgag
tcagaatctaataccaccaaagaagcagatgatccggacgccactgcgcaccttaaacca
ttacaatctgcaaaaacaatggcgttggccgtcctgaactctgctcctgaagtcgctgta
aaggagtctgttgaaaccggtgtgcatctagacccttctatgaaagaagttacttataat
ccatcctatgaaaccatgtttgcccctgagttcggtccagagaaccccttcaggtcacag
cagatgtctgctgtaagaaacatgttatctggctacgcagaacctgctcatgtcaacgac
ttcatgtttgaacaacaaaggaggacattttctacatttggatatgctttggatccatct
gtggacacaaatcaggtttctgctaccagttatattggagctgttgaggaagctgagaaa
agtaaaggtgtaacagtttttgagagtgggcacaagaaaccagaaaagaggaaaaaggtt
aaaggaggagatgcgggagagatagacaacttccttgggccttgggccaaatatgtagat
gagaaaaatgtggctaaaccaacagaggatgagaagaaatatttagaagaatacctcgca
aagaggcaaaagaggggcagggttgaggaagaggctccagctgaagagaagactattctc
catgtcaaggacatgtttgactaccagggcaggtcctacctccacattccccaggatgtg
ggtgttaacttgcgctctacagagcctcctgagaagtgttatcttccaaagaaacagatc
catgtttggtctggacacacaaagggagtcagtgctattcgactgtttccaggctcgggt
catttgcttttgtcctcttctatggactgcaagattaagttatgggaggtgtatggggaa
agaagatgtatacggacctttattgggcacagtaaagcagtgagagacatttgcttcaat
aatgccggcacacagtttcttagtgctggctatgaccgctacctgaaactgtgggactca
gaaacaggcaaatgtatctctcgcttcaccaacagaaaggttccctactgtgtcaagttc
aatccagatgaggacaaacagaacctctttgtggctggcatgtctgataagaaaattgtc
cagtgggacatccggacagaggaggtggttcaagagtacgaccggcacttgggagctgta
aacaccatcacatttgtggatgagaaccggcgcttcgtcagtacgtctgatgacaagagt
ctccgagtgtgggagtgggacatcccagtggacttcaaatacattgccgagcccagtatg
cactcgatgccagctgttacactgtctcccaacggtaagtggctggcatgtcagtccatg
gacaaccagattcttatctttggagcacagaaccgcttcaggctgaacaagaagaaggtc
ttcaaagggcacatggtggcgggttatgcctgccaagtggacttctctccagatatgagt
tatgtagtgtctggagacgcagatggaaaactaaacatttgggattggaaaaccaccaaa
ctgtatcaccggatcaaagcccacgacaaagtgtgcatcagcgccctgtggcaccctcac
gagacctccaaagtcatcacctgtggctgggacggacagatcaaactctgggactaa
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