Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110153111
Help
Entry
110153111 CDS
T05002
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03020
RNA polymerase
bpec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110153111 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
110153111 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpec03021
]
110153111 (polr2b)
03400 DNA repair and recombination proteins [BR:
bpec03400
]
110153111 (polr2b)
Enzymes [BR:
bpec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110153111 (polr2b)
Transcription machinery [BR:
bpec03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110153111 (polr2b)
DNA repair and recombination proteins [BR:
bpec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110153111 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
110153111
NCBI-ProteinID:
XP_020772646
LinkDB
All DBs
Position
Unknown
AA seq
1144 aa
AA seq
DB search
MYDQDEDPQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPHWERDGAPSPMMPNEARLRNLTYSAPLYVDITKTIIKEG
EEQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLDPGGYFIINGSEKVLIA
QEKMATNTVYVFAKKDSKYAYTAECRSCLENSSRPTSTIWVSMMARGGQGVKKSAIGQRI
VSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEMVKPSLDEAFVIQEQNV
ALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAA
LGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQKFIDRGKDFNLELAIK
TRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLA
KPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMENLEEI
SPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSEVSMIRDIREREIRIYT
DAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASGVVEYIDTLEEETVMLA
MTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVY
ITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINAIVAIASYTGYNQEDSSVF
YRSYKEQESKKGFDQEEIFEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGEDVIIGKT
VTLPENEDELDSTNRRYTKRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQ
IGDKFASRHGQKGTCGIQYRQEDMPFTCEGITPDIIINPHAIPSRMTVGHLIECLQGKVS
ANKGEIGDATPFNDAVNVQKVSNLLSEYGYHLRGNEVLYNGFTGRKLTSQIFVGPTYYQR
LKHMVDDKIHSRARGPVQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEA
SDPYQVHVCNLCGLMAIANTRTHTYECRGCRNKTQVSLVRMPYACKLLFQELMSMSIAPR
MMTS
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccaggacgaagatccgcagtacgatgaagacgacgacgagatcaccccagat
ctgtggcaggaggcctgttggatcgtcatcagctcgtactttgatgagaagggtctggtc
cggcagcagctggactcgttcgatgagttcatccagatgtctgttcagaggatcgtggag
gacgctcctcccatcgacctgcaggccgaggcgcagcacacgtcaggggaggtggaggag
ccgcactgggagagagacggagctccatctcccatgatgcccaacgaagctcgactacgc
aacctcacatactcggctcctctgtacgtggacatcactaaaaccatcataaaggaggga
gaggagcagctccagacgcagcaccagaaaaccttcatcggcaaaatccccatcatgctc
cgctccacctactgcctcctgagcggactcaccgacagagacctgtgcgagctcaacgag
tgtccgctcgaccccggggggtacttcatcatcaacgggtccgagaaggtgctgatcgct
caggagaaaatggccaccaacacggtttacgttttcgccaagaaagactcgaagtacgcc
tacaccgccgagtgccgctcctgcctcgagaactcgtccagacccaccagcaccatctgg
gtcagcatgatggcccgaggaggacagggagtgaagaagagcgcgatcggtcagaggatc
gtgtccacgctgccgtacatcagacaggaagtgcccatcatcatcgtgttcagagctctg
ggcttcgtgtccgacagagacatcctggagcacatcatctacgacttcgacgaccccgag
atgatggagatggtgaagccctctctggacgaggccttcgtgatccaggagcagaacgtg
gctctgaacttcatcggttctcgaggcgccaaacccggagtgaccaaagagcgcaggatc
aagtacgccaaggaggtcctgcagaaggagatgctgccgcacgtcggcgtcagcgacttc
tgtgagaccaaaaaggcctacttcctcgggtacatggtacatcgcctcctgctggccgct
ctgggacgccgtgagctggacgacagggatcactacggaaacaagaggctggacctggct
ggacctctgctggccttcctcttcagagggatgtttaagaatttactgaaggagattcga
atctacgctcagaaattcatcgaccgaggaaaagacttcaacctggagctggccataaaa
acacgcataatttcagacggactcaagtattcactggccacaggaaactggggggacgtg
aagaaagcgcatcaggccagagccggagtatcacaggtgttgaaccgtctgaccttcgcc
tccaccttgtctcacctgaggagagtgaactccccgatcggacgagacggaaaactggcc
aaaccccgacagctccacaacacgctgtgggggatggtgtgtcccgcagagacgcccgag
ggtcatgctgtgggtctggtgaagaacttggccctcatggcgtacatctccgtcgggtcc
cagcccagccccatcctggagtttctggaggagtggagcatggagaacctggaggagatc
tcgcccgccgccatcgcagatgccaccaagatctttgtgaacggctgttgggtcggaatc
cacaaggacccagagcagctcatgaacacgctgaggaaactgaggagacagatggacatc
atcgtatcagaggtgtccatgatcagagacattcgagagcgcgagatccggatctacacg
gacgccgggcgcatctgtcgcccgctgctcatcgtggagaagcagaagctgttactgaag
cgacgccacatcgaccaactcaaagagcgagaatacaacaactacagttggcaggacctg
gtggcgtccggggtggtggagtacatcgacactctggaggaggagacggtgatgttggcc
atgacccccgacgacctccaggagaagggcgtggcctactgctccacctacacccactgt
gagatccacccgtccatgatcctgggagtgtgcgcctccatcatccccttccccgaccac
aaccagtctcccaggaacacgtaccagtcggccatggggaaacaggccatgggcgtctac
atcacaaacttccacgtgcgcatggacactctggcccacgtcctctactacccccagaaa
cccctggtcaccaccaggtccatggagtatctgcgcttcagagagctgccagcaggcatt
aacgccatcgtggccatcgcgtcgtacaccggatacaaccaggaggactcgtctgtgttc
tatcgctcgtacaaagagcaggagtcaaaaaaaggattcgaccaagaggagatttttgag
aagccgacacgagaaacctgccagggtatgagacacgcgatctacgacaaactggacgac
gacgggctgatcgctccgggcgtgcgcgtctccggggaggacgtgatcatcgggaagacg
gtgactctccccgagaacgaggacgagctggactccaccaaccgccgctacaccaaacga
gactgcagcaccttcctgcgcacgtccgagaccggcatcgtggaccaggtcatggtcacg
ctcaaccaggagggctacaagttctgcaagatcagggttcgttccgtcaggattcctcag
atcggagacaaatttgccagtcgacacggacagaagggaacctgcgggatccagtacaga
caagaggacatgccgttcacgtgtgagggcatcactccagacatcatcatcaaccctcac
gccatcccctccagaatgactgtgggccatctgatcgagtgtctgcaggggaaggtgtcg
gcgaacaaaggcgagatcggagacgccacgccgttcaacgacgccgtcaacgtgcagaaa
gtgtccaacctgctgtcggagtacggctaccacctccgaggaaacgaggttctgtacaac
ggcttcaccgggaggaagctgacgtctcagatcttcgtcggtcccacgtattaccagcgt
ctgaagcacatggtggacgacaagatccactccagagccagaggcccggtccagatcctc
aacagacagcccatggagggacgatcccgtgacggcgggcttcgtttcggggagatggag
agagattgtcaaatcgctcacggcgccgctcagtttcttcgtgagcgtttgttcgaggcg
tcggatccgtaccaggtccacgtgtgtaacttgtgtggactcatggccatcgccaacaca
cggacgcacacctacgagtgcagaggctgtcgcaacaagacacaggtgtcgttggtccgg
atgccgtacgcctgtaaacttctgttccaggagctcatgtccatgagcatcgctcctcgg
atgatgacgtcataa
DBGET
integrated database retrieval system
