Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110153363
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Entry
110153363 CDS
T05002
Symbol
hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bpec03036
]
110153363 (hfm1)
Enzymes [BR:
bpec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110153363 (hfm1)
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Meiosis-specific proteins
Others
110153363 (hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
110153363
NCBI-ProteinID:
XP_020772902
LinkDB
All DBs
Position
Unknown
AA seq
1455 aa
AA seq
DB search
MLDSDGSTSYLDSLFFEKPIVHEVRPLRQETSQWQVEIPPSLSQIPGFSQAPQQKKFAPR
FKKSSDLNILPSVSKLSYNLNTDDHETEVGQSSVTQGCNSPADLWGGKGFREFFEAGSTR
AKTPQASGHIIDDGKIMSLDDSESPFLRRSLFKSQMLGNGGDLSNTCSVSQTAFRPQSFP
GQVAMATAPPVPPPPLQPLRTTMRQAVRPMPPTDSPLQPAPEIGDTKRVLVPPMTPQPLC
IQGGSAAGVLRSVAEVPSKFRSVFDFPFFNYVQSSALDDVFYTGRNFVASAPTGSGKTVL
FELAIIRQLMETSEPWADFKAVYMAPIKALCSQCFENWKRKFGPLGLKCKELTGDTQIDD
FFEIQDSHIILTTPEKWDSMTRKWKDNCLLELVRLFLIDEVHVVKDATRGATLEVVVSRM
KTVNAYRSAQDPEGTASMRFVAVSATIPNITDIADWLCDNSGPATYLNMDESHRPVKLRK
VVLGFPCNPSQTEFRFDLTLNYKMANIIQTYSDHKPTLVFCTTRKGAQQAAAVLAKDARF
LLTVEHKQRLIQYANSILDSKLRDMMVLGVGYHHAGVDLSDRKLIETAFTKGDLPVLFTT
RTLAMGVNLPAHLVVIKSTMQYVGGACEEYSEADLLQMIGRAGRPQFDTSATAVIMTKNQ
NKDKYMSLMNGMEIIESSLHSNLVEHLNAEIVLHTISDVNMALDWIRSTFLYIRALKNPR
HYGFSPDLDRRGIESKLQELCLKNLNALSSIELIHMDEDINIKPTEPGRLMARYCVAFET
MKQFSQILGTETLSDLTQLVSKSKEFSDIQLRMNEKRLLNTLNRDKNRTTIRFPMEGKIR
TNDMKVNCLIQAQFGSITIQEFGLTQDTAKIFRTGLRIGRCLCEYLSLKLKTGFSAVHGA
LILSKCLRAKLWENSPFVSKQLEKIGPSLSAAMVNAGLTTFSKIEDTNAREIELILNRHP
PFGNQIREAVIHLPKYELAIEQLPRYSPTTAEIVVKVNLKNLSQLQTKRTASDQHYMSLI
IGDADNNVVYLQKVTDLVLLKGRLWSKRIELSRASKGSEISVHLISCDYVGLDVQHKFSV
FYSGAASESVSKPRHTQNTPQTTVRREHREYGTVPQGLVILGFSVSHSNYLGIMRECNHF
CKNKDLCAHDCCKIGVTIPKRRAAKPEFSSYLNDLKTRCDTMIQTPAKRLKMKMETEEPA
YSRMQEYAYQPKDKMQIVPRYQGSSDEVPSRPYIETVDLTQEQDSHNFYDDHEEVEVFDQ
KPPIYETYQKGVAMDQSYIPTPSTRWPAADPIQDLHYQQSSQIPNINFDLGNQWDEFDEE
NLINTSETLGSAPFLQYNKTGFVAPSVPCVTSFATPVRSSVCKIKTDLPSPRLSPSASRL
TLNLSKKIFGQTPGIFGDEVTVKTPEITQRQIPLTNSFGFFSKVNNTPVYDQSTEINSVV
IKEEDAFLGIFDGIF
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgttggattcagatggctctacgtcatatctggacagtcttttttttgagaaacctatt
gttcatgaagtaaggcctttacggcaagagacgagtcaatggcaggtggagatacctccg
tctttgtctcagatccctggtttttcacaggcacctcaacaaaagaaatttgctccccgt
tttaaaaagtcttctgacttgaacatcttgccatcagtcagcaaactttcctacaatctt
aacactgatgaccatgaaactgaagttggtcaaagtagtgtcacccaaggctgtaactct
cctgctgatctgtggggaggtaagggcttcagggagttttttgaagctggcagtaccaga
gccaaaaccccacaggcctctgggcatatcattgatgatgggaagattatgtccctggat
gacagtgaaagccctttcctgcgaagaagcctgtttaaatctcagatgctgggtaatgga
ggtgacttatcaaacacctgtagtgtcagtcaaacagcatttcgacctcaaagttttcct
gggcaagttgccatggctacagccccaccggtaccacctcctccgctccagccgctacgc
acgacaatgcgccaggcggtccgcccaatgccccccacagactcacccctccaaccagcg
ccagagatcggggacacaaagagagtgctagtccctcccatgacacctcagcccctctgc
atacaaggtgggtcagcagctggagtgttgagatcagtggccgaagtaccatccaagttc
agaagtgtctttgacttccccttcttcaactatgtacagtccagcgctttagatgatgtt
ttttacactgggaggaactttgtggcctcagctccgactggatctgggaaaactgtgttg
tttgagctggccatcattcgtcagcttatggagacctcagagccatgggctgacttcaag
gctgtatacatggcacctatcaaggccttgtgcagtcagtgcttcgagaactggaaaagg
aagttcggcccactgggactgaagtgcaaagaactgacgggagacacacagatcgatgac
ttcttcgagattcaagattcacacatcatcctgaccactcctgaaaagtgggacagcatg
acaaggaaatggaaggataactgtctgctggagctggtcagacttttccttattgatgag
gttcatgtggtgaaagatgcgacccgtggagccactctggaggtggtggtgagtcgcatg
aagacggtgaatgcctacaggagcgctcaggacccagagggcaccgcatccatgaggttt
gtggcggtctcggccacaatcccaaatatcactgatatcgcagactggttgtgtgacaac
agcggtccggccacttacctgaacatggacgagagccaccgcccggtaaagctgaggaag
gtggtgctggggtttccctgtaatccgagtcagaccgagttcaggtttgacctgactcta
aactacaagatggccaacatcatccagacctactcagaccataagcccactttagtgttt
tgtacgactcggaaaggagcccaacaggcagctgcagttttggcaaaggatgctcggttt
ctgctgactgtggagcacaagcagaggctcatacagtatgccaactctattttggactcc
aaactaagagacatgatggtgcttggagtgggctatcatcacgctggagtagatttgtca
gataggaagttgatcgaaacagccttcactaagggagatcttccagttctttttactacc
aggactttagcaatgggggtgaatcttcccgctcacttggtggtgataaagtccacgatg
cagtatgtgggcggagcctgtgaggagtacagtgaggccgacctgctgcagatgattggt
cgagctggacgtccacaatttgacacttcagcgactgctgtgatcatgaccaagaaccaa
aacaaagacaagtatatgtctctaatgaatgggatggagatcattgaaagcagtttacac
agtaacttagtggagcacctaaacgctgaaattgtcctccacaccataagtgacgtgaac
atggctttagactggatccgctctacttttctctacatccgagctctaaagaaccccaga
cactatggtttctctcctgatttggacagacgagggattgagtccaagttacaagaacta
tgcctcaaaaacctgaacgctctgtcatccatcgagctgattcacatggatgaagatatc
aacattaagcccacagagcccgggcggctgatggctcgttattgcgttgcttttgagacg
atgaaacagttcagccaaattttaggcacagaaactctgtctgacctgacccagctggtg
tcaaaaagcaaagaattcagtgacatccagctgcgcatgaatgagaaaaggctgctgaac
actttgaacagggacaagaaccgcaccaccattaggttcccaatggaaggaaagatccga
accaatgacatgaaagtgaactgtttgatccaggctcagttcggctccatcaccatccag
gagtttggactgacccaggacacagcaaagatcttcagaactgggctgcgcattgggaga
tgtttgtgtgaatatttaagtctgaagttgaagacaggtttctctgctgtgcacggagct
ctcatcctctccaagtgtctcagagccaaactgtgggagaactctccctttgtctccaaa
caactagagaagataggcccgagtctgtccgctgccatggtcaacgctggactcactact
ttcagcaaaattgaggatactaatgccagagagatagaactgatcttaaaccggcatcca
ccatttggaaaccagatcagagaagctgtcattcacctgcctaaatacgagctagccatc
gaacagctcccccgctacagccccaccactgcagagatagtggttaaagtcaacttaaaa
aatctctcccaactgcaaactaaaagaacagcctctgaccagcactacatgtctctcatc
atcggagacgcagacaacaatgtggtctatctacagaaagtcacggacttggtgctgtta
aaaggcaggttatggtcaaagcgcattgaactgagcagagcctcaaaaggatcagagatc
agtgtgcacctcattagctgtgattatgtgggattggatgttcagcacaagttcagcgtg
ttttactctggagcagccagcgaaagtgtttctaaaccaagacacacacaaaatacccca
caaacaacagtgagaagagagcacagagaatatggcactgttccacaaggtctggttata
ctgggtttttctgtctcccattcaaactatttgggcataatgagagagtgcaaccacttt
tgcaagaacaaggacctctgtgcccacgactgctgtaaaataggagtaaccattccaaag
aggcgagctgcaaaaccggagttctcttcatatttgaatgacctgaaaacgagatgtgac
acaatgatccagactccagccaaacgcctgaagatgaaaatggagacggaggaaccagcc
tatagcagaatgcaggagtatgcctatcaacccaaagacaaaatgcagattgtgccaaga
tatcaaggaagttcggatgaggtcccgtccagaccttacattgagactgtggatttgaca
caagaacaggactcacacaacttttatgatgatcacgaagaagttgaagtctttgaccag
aagcctcccatttatgaaacataccaaaaaggagtcgccatggatcagtcctacattcct
acacccagtactagatggccggcagcagatcccatccaggatctacactatcaacagagt
tctcaaattccaaatatcaacttcgaccttggaaaccagtgggatgagtttgacgaggag
aacttgatcaacaccagcgaaacattaggaagtgccccatttttacaatacaacaaaaca
ggctttgttgctccgtcagtgccctgtgtgacatcttttgcaacaccagtgaggtcatct
gtctgtaagattaagactgatctgcccagtcctcggctttctccatcagccagcagactc
actcttaacttaagtaaaaagatatttggacaaacgccgggaatatttggagatgaggtg
acagtaaaaactccagaaatcacccaacgtcagataccgctgacgaacagctttggtttc
ttctcaaaagtgaataatacaccagtatatgaccagtcaacggagatcaacagtgttgtg
attaaagaagaggacgcatttcttggaatttttgatggaatattttag
DBGET
integrated database retrieval system
