Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110154140
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Entry
110154140 CDS
T05002
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110154140 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpec03041
]
110154140 (prpf8)
Spliceosome [BR:
bpec03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110154140 (prpf8)
Complex C
U5 SnRNP specific factors
110154140 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
110154140
NCBI-ProteinID:
XP_020773743
LinkDB
All DBs
Position
Unknown
AA seq
2337 aa
AA seq
DB search
MASFPFRGLPAGMPPGVPPPAPVPEYMTEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQK
EDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPV
LYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDY
ADNILDVEPLEAIQMELDPEEDASVVEWFYEHQPLKDTTKFVNGTTYRRWQFTLPMMSTL
YRLANQLLTDLVDLNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFND
INKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINP
ISHRHSIKIQEPLPDDDEEFELPEFVEPFLKETPLYTDNTANGIALLWAPRPFNLRSGRT
RRAIDIPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKA
TKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKS
RFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKL
MRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLAR
QFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSESWR
CWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGR
LTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTKL
LILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEF
MDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQG
INNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVIN
YKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQNIP
TESAHPIRLYCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDA
RMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILP
KCRTSYEEFTHKDGVWNLQNEGTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTK
IVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYT
PKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESE
FIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRV
RTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTW
EGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLT
GIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRK
SYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIER
YARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANP
ALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNL
TTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQP
KQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFN
LYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLSDEEWIK
VEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQ
LTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIK
ETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTHQTVH
LPNQLPGHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSF
TPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQVS
WNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGEIYNADREDMYA
NT seq
7014 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttccatttaggggtttacctgcgggaatgcctcccggggtccctcctcct
gcaccggtacctgagtacatgaccgaagaaaaactacaagaaaaggcacgaaaatggcag
cagctgcaggcaaaacgttatgcagaaaagagaaagtttggttttgttgacgctcagaag
gaagacatgccccctgaacatgtgcgcaagatcatcagagaccatggagacatgaccaac
cgaaagtttcgccatgataaaagagtttatcttggggcactgaaatacatgccccatgca
gtgttgaagttattggaaaacatgccaatgccatgggagcagattagagacgtgccagtt
ctctatcacatcactggcgccatctcttttgtcaatgaaattccttgggtcattgaacct
gtctacattgctcagtggggcacaatgtggattatgatgcgccgtgaaaaacgagacagg
cgacatttcaaaagaatgcgctttccgccttttgatgatgaagaacccccactggattat
gctgacaatattttagacgttgagcctctagaggctattcagatggagttggatccagaa
gaagatgcttcagttgtggagtggttctatgagcaccagcctctcaaagatactacaaag
tttgtgaatggaacaacataccgtcgctggcagttcacacttcccatgatgtccactttg
taccgtttggctaaccagcttcttacagaccttgtggacctcaattacttctatctcttt
gacctgaaggccttctttacttcaaaagccttaaacatggctatccctggaggaccaaag
tttgagcccttggttcgagacataaatcttcaagatgaggactggaatgaatttaatgac
atcaacaagatcatcattcgtcagccaatcaggactgaatacaaaattgcctttccctat
ctgtacaacaatctgccgcaccatgttcacctcacttggtatcacacacccaatgtggta
tttatcaagactgaggatcctgatcttcctgctttctactttgatccactgatcaatccg
atttcgcacaggcattctatcaaaattcaagaaccactgcctgatgatgatgaggagttt
gagcttccagagtttgtagaacctttcctcaaagaaactcctctgtatacagacaataca
gccaatggcattgcattgctttgggcaccaagaccattcaatctaaggtctggccgcacc
agacgtgccattgacatccccttgatcaaaaactggtatcgagagcattgcccagctgga
caacctgtgaaagtacgtgtgtcctaccagaaacttctgaagtactatgtgctcaatgct
ttgaaacacagacctcccaaagcccagaaaaagaggtacctgtttcggtcatttaaggcc
acaaagttctttcagtcgaccaagctagattgggtggaggttgggcttcaggtgtgccga
cagggctataacatgctcaaccttcttatccatcgtaaaaacttgaactacctccatctt
gactacaacttcaacctgaaacccgtgaagacactcaccacaaaggagcgtaaaaagtca
agatttggcaatgccttccatctttgccgagaagttttgcgtctgagcaaattggtggtt
gacagtcatgtgcagtatcgccttggcaatgttgatgctttccagttggctgatgggcta
cagtacatctttgctcacgtgggtcagctgactggtatgtaccgttacaagtacaagctg
atgagacaaatccggatgtgtaaggacctaaagcatctgatctactaccggttcaacact
ggaccagtaggaaagggtccaggttgtggattctgggctcctggctggagagtgtggctc
ttcttcatgcgtggaataactccgttattggaaaggtggcttggaaatctactagccaga
cagtttgaaggtcgtcactccaagggtgttgccaagactgttactaagcagcgtgtggag
tctcattttgacctggagctgcgtgcggctgtgatgcacgacatcctggacatgatgcca
gagggtatcaaacagaacaaggccagaaccatacttcagcatctgagcgagtcttggaga
tgctggaaagccaacatcccctggaaggtcccaggtctacctactccaattgaaaacatg
atcttgagatatgtgaaggccaaagctgactggtggaccaacacagcccactacaaccgt
gagcgaattcgcagaggagctactgtcgacaaaactgtgtgcaagaaaaatctgggtcga
ctgacccgcctgtacctcaaagcagagcaggaaagacagcacaactatctgaaggatggc
ccctacatcacagcagaagaagctgtggccatctacaccaccactgtccactggcttgaa
agtaggcgtttttcacccatccccttccctccactgtcatacaaacatgacacaaaactg
cttattctggcactggaaagactcaaggaagcttacagtgtgaagtctcgtctgaaccag
agtcagagagaggaacttgggttaattgagcaggcgtatgacaacccacatgaagcactg
tctaggatcaaacgtcacctgcttactcagagagccttcaaagaggtgggcattgagttc
atggatctgtacagtcatctggtgcctgtctatgatgtggagcccctagaaaagatcaca
gatgcctatctggatcaatatttgtggtatgaggcagataagagacgactgtttccgcca
tggatcaaacctgcagacactgagccaccacccttgctggtatacaagtggtgtcaaggc
atcaacaacttgcaggatgtatgggagactgctgagggagaatgcaatgtaatgctggag
tctcgctatgaaaaaatgtatgagaagattgatctgacgttgctcaacagactgttgcgt
ctcattgttgaccataacattgctgattacatgactgcaaagaacaacgtggttatcaac
tacaaggacatgaaccataccaattcatatggtattatcagaggactgcagtttgcctca
ttcattgtccaatattatggattagtaatggatctgcttgtcctgggcttgcatcgtgcc
agtgagatggctggacctcctcaaatgccaaatgactttttaagtttccaaaacataccc
actgaaagcgcccacccaatcagactctactgtcgttacattgaccgcatccacatcttc
ttcaggtttacagctgatgaggccagagatcttattcagagatacctaacggagcaccca
gacccaaataatgagaacattgttggttacaacaacaaaaaatgttggccacgagatgct
cggatgcgactcatgaagcacgatgtcaaccttggacgagcagtcttctgggatatcaag
aatcgtctccctaggtcagtgactactgttcagtgggagaacagctttgtgtcagtctac
agcaaggacaaccctaatctgctcttcaacatgtgtggctttgagtgtcgcatcctaccc
aagtgtcggaccagctacgaggaatttactcacaaggacggtgtctggaacctgcagaat
gagggtactaaagaaagaacagcacagtgtttcctgagagtggatgatgagtccatgcag
cgcttccacaacagagtccgacagattctgatggcatctggctccacaacattcaccaag
attgttaacaaatggaacactgctctgattggattgatgacttatttccgtgaggcagtt
gtaaacacacaggagctcttggaccttttggtaaagtgtgaaaacaagatccagacacgt
atcaagatcggcctcaactcaaaaatgccaagtcgttttccgccagttgtcttttacaca
cctaaagaattgggtgggcttggtatgttgtctatgggccatgtgctaattccacagtct
gatctacggtggtccaagcaaacagatgttggaatcacccatttcaggtcaggaatgagc
catgaagaggaccagcttattcctaacttgtatcgctacatccagccatgggagagtgag
ttcattgactctcagagagtctgggctgagtatgctttaaagagacaggaggctattgca
cagaatcgccgattaacactggaggatttggaggactcctgggacagaggaatcccacgc
atcaacacactgtttcagaaggacagacatacattggcctatgacaagggctggagagtc
agaactgatttcaagcaatatcaggtgcttaagcagaatccattctggtggactcatcag
agacatgatggaaaactgtggaacctcaacaactaccgcacggacatgattcaggctctg
ggtggagttgaaggcatcctggaacacacactgtttaaaggcacttactttcccacttgg
gaaggtctcttttgggagaaggccagtggttttgaggagtcaatgaaatggaagaagcta
actaatgctcagaggtctggtctcaatcaaatccccaatcgtcgtttcacactttggtgg
tctcccaccattaacagagccaatgtgtatgtcggttttcaagtgcagcttgacctgaca
ggaatcttcatgcatggcaagatcccaacactgaagatctccctcattcagattttcaga
gctcacttgtggcagaaaatccatgaaagcattgttatggatctttgtcaggtgtttgac
caagagcttgatgctcttgagattgagactgtgcaaaaggagaccatccatcccagaaag
tcatacaaaatgaattcatcttgcgcagacatcctcctctttgcatcttacaagtggaat
gtctcaagaccatccttgctggcagactcaaaagacgtcatggacagcaccactacacaa
aagtactggattgacattcagttgcgttggggtgactatgactctcatgacattgagcgc
tatgccagggccaaatttctggactacacaacagataacatgagtatctacccgtccccc
actggtgtgctcatagccattgacctcgcttacaatcttcacagtgcctatggaaactgg
ttccctggaagcaagcctctgatccagcaagccatggccaaaatcatgaaggccaaccct
gctctctatgtgttgagagagcgaatccgcaaaggtctgcagctgtactcttctgagccc
actgagccttacctgtcatcccagaactatggtgaacttttctccaaccagatcatctgg
tttgtagatgacacaaatgtgtatcgtgtcaccatccacaagaccttcgaaggtaacttg
accacgaagcccatcaatggagccattttcattttcaaccccagaactggccaactcttc
cttaagatcattcacacctctgtgtgggctggtcagaaacgtttaggccagcttgccaag
tggaagaccgctgaagaagtagctgccctgattcgttctcttcctgttgaggagcaaccc
aaacagatcattgtcacacggaaaggaatgcttgaccctcttgaggtgcacttgttggac
ttccccaacattgtaatcaaaggttctgagctgcaacttccctttcaagcttgtctgaag
gtagagaagtttggagacctgatccttaaggccacagaaccccagatggtgctgtttaac
ctctacgatgactggctgaagaccatctcatcatatacagcattctccagactgatcctg
atcctcagagcacttcatgtcaacaatgaccgtgctaaggtcattctcaaaccggacaaa
accacaatcacagagccccatcacatctggcctactctgtctgatgaggagtggattaaa
gtggaggttcaactcaaggatcttattttagcagactatggcaaaaagaacaatgtgaat
gtggcatcacttacacagtcggagatccgggacattattctgggcatggagatttcagct
ccctcacaacagcggcagcaaattgctgagattgagaaacagacaaaggaacagtcacag
ctgacagctacacaaacccgcacagttaacaagcatggtgacgagatcatcacatcaacc
acctccaactatgaaacccaaactttctcatccaagactgagtggagagtcagggctata
tctgctgcaaacctccacctgcgcacaaaccacatctatgtctcctctgatgacatcaaa
gagacaggctacacctacatcctgcccaaaaatgtcctcaaaaagttcatctgcatttca
gatcttcgagcacaaattgcaggatacttgtatggcacaagtccaccagacaaccctcaa
gttaaagagatccgctgtattgtgatggtgccacagtggggaacacatcagaccgttcat
ctgcccaaccagctgcctggccatgaatacttaaaggaaatggagcccttaggttggatc
cacacacagccaaacgagtctcctcagctgtccccgcaggatgtcaccactcacgctaag
atcatggcagacaacccctcgtgggatggagagaagaccatcatcatcacctgcagcttt
actccaggctcttgcaccctgacggcttataagctgacaccaagtggctatgaatggggt
cgtcagaacactgacaagggtaacaaccctaagggctacctaccgtcgcactatgagaga
gtgcagatgctgctgtctgatcgcttcctgggctttttcatggttcccggccaggtgtcc
tggaactataacttcatgggtgtacgccatgaccccaacatgaaatatgatctgcaactg
gccaaccccaaagagttttaccatgaagtccacagaccctcgcacttcttaaacttcgcc
tcactgcaggagggcgagatctacaatgcagaccgtgaagacatgtatgcttaa
DBGET
integrated database retrieval system
