Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110154551
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Entry
110154551 CDS
T05002
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110154551 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bpec01007
]
110154551 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpec03016
]
110154551 (farsb)
Enzymes [BR:
bpec01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
110154551 (farsb)
Amino acid related enzymes [BR:
bpec01007
]
Aminoacyl-tRNA synthetase
Class II (U)
110154551 (farsb)
Transfer RNA biogenesis [BR:
bpec03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
110154551 (farsb)
Prokaryotic type
110154551 (farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synthFbeta
EF1_GNE
PhetRS_B1
B5
B3_4
EF-1_beta_acid
Arc1p_N_like
EAD7
Motif
Other DBs
NCBI-GeneID:
110154551
NCBI-ProteinID:
XP_020774203
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MPTVGVKRDLLFKALGKTYTDEEFDELCFEFGLELDEITSEKEIISREQGDSKASGASDI
ILYKIDVPANRYDLLCLEGLVRGLQVFKNKLEAPRYRRVRPASGEPQKLIITKETAAVRP
HAVAAVLRNITFTQEKYDSFIELQEKLHQNICRKRSLVAIGTHDLDTISGPFTYTAKPPA
QINFKPLNQTKEYSATELMSLYKTDSHLRHYLHIIEDKPVYPVIYDSNGIVLSMPPIING
DHSKISLQTKNVFIECTATDVTKAKIVLDMMVTMFSEYCAQPFTVEEAEVVYPDGKTCIY
PELAYRTEKLSSEFINRKVGINESTEKIAQLLTKMCLKSKATGAGDEIEVEIPPTRSDVI
HACDIMEDAAIAYGFNNIIRTTPRTYTVANQFPINKLTELLRQDLAAAGFTEALNFALCS
KEDIADKLGKKIEDTKAIHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISD
VVLKDATKDVGARNSRRFCAVYYSKSPGFEVIHGLLDRTMQLLEVSPGEGYSIRAADDCT
FFPGRCAEIFVRGQSVGRLGVLHPDVITRFELTMPCSALEMDLQPFLGHTAEISLSHDVP
LKETKIHHFPTNPGSSQCPVLINPTSTKTTFGDMSTQAGLKSLNSFLADKSYIEGFSASQ
ADVAVFEAIPSSPPSNLSHLLRWYNHVKSFYAEKSSLPASKSQYVIPDPTQNNGSVINDD
DEDLDLFGSDDEDEEAEKIKQQRLAEYAAKKAKKPALIAKSSILLDVKPWDDETDMVKME
ECVRSVEMEGLLWGQSKLVPVGYGIKKLQIGCVVEDDKVGTDMLEEAITAFEDYVQSVDV
AAFNKI
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcggagtaaaacgggaccttcttttcaaagcgctgggcaaaacatacacg
gatgaggagtttgatgagttatgctttgaatttgggttggagttggatgaaattacttct
gaaaaggaaataattagcagagaacaaggagactccaaagcatccggggcatctgatata
atcctgtacaaaattgatgttccagccaatcgctatgacctgctctgtctggagggcctg
gtccgtgggctacaggtcttcaagaataagttggaggccccacgatacagacgtgtccgc
cctgcgagtggagagccccaaaagctcatcatcacaaaggagacagctgcagttcgacct
cacgctgtcgctgcagttttgaggaacatcacattcactcaggagaagtatgacagcttc
attgagctccaggagaaactgcaccagaacatctgcagaaagagaagcctggtggccatt
gggactcatgatttggacacaatctctggtcctttcacatacacagccaaacctccagct
cagatcaacttcaaacctctgaaccaaaccaaagagtacagcgccacagagctcatgagc
ctatacaagacggacagccacctgcgacattaccttcacattattgaagacaaacccgtg
tatcctgttatctacgacagcaatggcatcgtcctctccatgccccccatcatcaacgga
gaccattcaaaaatcagtctccaaaccaagaatgtcttcattgagtgcacggccacagat
gtgaccaaggctaagattgttttggacatgatggtgacgatgttcagcgaatattgcgcc
cagcccttcacggtagaggaggcagaagtggtttaccccgatggaaagacctgcatttat
cctgagctggcctacaggacggagaagttgtccagtgaattcataaaccgcaaagtggga
ataaatgagtcaacagaaaagattgcccagcttctgaccaagatgtgcctaaagtctaaa
gccacaggagccggagatgagatcgaggtagagatcccacccactcgctctgatgtcatc
catgcatgtgacatcatggaggacgccgccatcgcctatgggttcaacaacatcatccgc
accacacccagaacttacaccgtcgcaaatcagtttcctatcaacaaactgacagagctg
ctgagacaggacctggctgcagcaggttttactgaagccctcaactttgccctgtgctct
aaggaggatatcgcagacaaacttggaaaaaagatcgaagacaccaaagccatccacatc
tccaaccccaaaacagcagagttccaggtggcgcgcactaccttgctcccagggctgttg
aaaaccattgcagccaacagaaagatgccgctgcctctgaagctgtttgagatttctgat
gtggttctaaaggatgcaactaaagatgtgggggcgaggaacagccgtcgtttctgtgcg
gtctactacagtaagagtcccggttttgaggtgatacatgggctcctggacagaaccatg
cagctgctggaggtcagcccaggggaaggctacagcatcagggctgcagatgactgcacg
ttcttcccgggccgctgtgctgagatctttgtgcgggggcagagtgtggggcgcctcggg
gtcctccatccggacgtgatcactcgctttgagctgaccatgccctgctccgctctcgag
atggacctgcaaccattccttggccacacagctgagatttccctatcccacgacgttcca
ttgaaagaaaccaagattcaccatttcccaacaaaccctggatcttcacagtgccctgtc
ctcatcaatccaacctcgacgaaaactacattcggagacatgagcacccaagccggcctg
aaatccctaaacagtttcctagcggataaaagctacattgagggattttctgcatcccag
gccgacgttgctgtttttgaagccatcccttcctcaccaccatcaaatctttcccatcta
ctccgctggtataatcatgtgaaatcattctacgcagagaaatccagtctaccagcgtcc
aaaagtcaatacgtaattcctgaccccactcaaaacaacggaagtgttatcaatgacgat
gacgaagacttggatttgtttgggtccgatgatgaagacgaagaagcggaaaagatcaag
caacaacgccttgcagaatacgcagcgaagaaggccaagaaaccagctttgatcgccaaa
tcttctatccttctcgatgttaaaccctgggatgacgagacagatatggttaaaatggag
gagtgcgttcggagcgtggagatggagggtttgctgtgggggcagtccaagctggttccg
gttggatatgggattaagaaactccagatcgggtgcgtggtggaggatgataaagtgggg
acagacatgttagaagaggccattactgcatttgaggactacgtgcagtctgtggatgta
gcagcgtttaataagatctga
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