Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110155253
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Entry
110155253 CDS
T05002
Symbol
hif1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04137
Mitophagy - animal
bpec04140
Autophagy - animal
bpec04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110155253 (hif1a)
04137 Mitophagy - animal
110155253 (hif1a)
04148 Efferocytosis
110155253 (hif1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpec03000
]
110155253 (hif1a)
Transcription factors [BR:
bpec03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
110155253 (hif1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
110155253
NCBI-ProteinID:
XP_020774979
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MDAGVVPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAQQLPLPHSVSSSLDKASIMR
LTISYLRMRKLLSNDEVSEEEESDLDMQLNSSYLKALEGFLMVLSEDGDMIFLSENVNKC
LGLAQFDLTGHSVFDFTHPCDQEELREMLIHRTGSKKAKEANTERSFFLRMKCTLTSRGR
TVNVKSATWKVLRCSGHVRVFENLTEDISNGQKEPPVPYLVLICDPIPHPSNIEVPLDTK
TFLSRHTMDMKFTYCDERITELMGYEPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQV
CTGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIEEERMILSLEQTEDL
KPVKEEQLEAVEEPVEESSPELVPPPLKDEKVPELDVIKLFTRAEAQPLVSLYDQLKEEP
EALTLLAPAAGDTIISLDFSCPDSEVQLLKEVPLYNDVMFPSSSDKLALPLSPLPSSEPL
TVPSTPTEMVKAESFTPAPCNTANNSPTQAQSPLEFSLMETEINSEFKLDFVEKMFAIDT
EPKTPFTKQALEDLDLEMLAPYIPMDDDFQLLSLTGEPLSCGPDTSVERPNVQVTKESSS
YPDSPSDSQHTASPAPPDPVGIPHLATIISKRTPQLDKEVSLRTQAAQNAQRKRKLDDIK
TVGQGALLLEPFKKPKAPESKNAEKGSVQRTILPSDLASRLLGSSENCSSVLTLPQLTQY
DCEVNAPLQGRQYLLQGEELLRALDHVN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggacgctggagtcgtacccgagaaaaaaagagtgagttcagaacgccgcaaagaaaag
tcccgagatgcagcgagatgccggcgtgggaaggagtcggaggttttctacgagctggcc
cagcagctgcctctgccccacagtgtcagttccagtctggacaaggcctccatcatgaga
ctgaccatcagctacctgcgcatgaggaaactgctcagtaatgatgaggtgtcagaggag
gaggaaagtgacctggacatgcaactcaacagttcctacctaaaggctctggaaggcttt
cttatggtgctgtcggaagatggagatatgatcttcctgtccgagaatgtcaacaaatgc
cttgggctggcacagtttgatctgactggacacagtgtgtttgacttcactcatccctgt
gaccaagaggagctgcgggagatgctgatccacagaacaggctcaaaaaaagccaaagag
gccaacacagaacgcagcttttttctgcgaatgaaatgtactctgaccagcagaggccgc
actgttaatgtcaagtcagccacttggaaggtattgcgatgctctggacatgtccgtgtt
tttgagaacctgacagaggacatttctaacggacagaaggaaccacctgtgccctatttg
gtgctgatctgtgaccccatccctcacccctctaacattgaggtgcctcttgacacaaag
accttcctgagccgtcacaccatggacatgaagtttacctattgtgatgaacggatcaca
gagctgatgggatatgagccagaggacctcctgaaccgatcagtctatgagtactatcat
gctctagactcagaccacctcaccaagacgcaccacaacttatttgctaagggccaggtt
tgcactggacagtatcgcatgcttgccaagagaggaggctttgtatgggtggaaacccaa
gccacagtcatttacaacaacaagaactcacagccacagtgtgtagtctgtgtcaacttt
gtgctgagtggcattgaggaggagcggatgatcctgtccctggagcagacagaggatttg
aagccagtgaaagaggagcagttggaggctgtggaggagcctgtggaggaaagcagccca
gagttggtcccacctcccctcaaagacgagaaggttcccgaacttgatgtcatcaagctc
ttcactcgggcggaggcccaaccactggtcagcctgtatgatcagctcaaagaggagccc
gaggcactgactctactggctcctgctgcaggggacacaatcatctccctggatttcagc
tgcccagactctgaagtccagctgctgaaggaggtccctctctacaatgatgtaatgttt
ccctccagcagtgacaaactggcccttcccctgtctccactgccctccagtgagcccctc
actgttccgtccactcccactgagatggtcaaagcagagagcttcactcctgctccatgc
aacacagcaaacaacagccccacccaggctcaaagtccactggaattctctttaatggaa
actgaaattaattctgaattcaaattggactttgttgagaaaatgtttgccattgatacg
gaaccaaagactccttttacaaaacaggcattggaagacttggatctggagatgctggcc
ccatacatacccatggatgatgattttcagctgctgagcctgacaggggagcctctgtcc
tgtggaccagacacatctgtggagaggcctaatgtgcaagtcacaaaagaaagcagcagt
tatccagactctccttcagacagccagcacacagcctctcctgctcctcctgatcctgtc
ggcatccctcacctcgctaccatcatctccaagagaacaccacagttggacaaagaagta
tccctccgaacacaggcagctcaaaatgcacaacggaaaagaaagctggatgatataaaa
acagtaggacaaggcgctttacttttggagccatttaaaaaaccgaaagcccctgaatcg
aaaaatgcagaaaaggggagtgtccaaaggactatactaccttcagatttggcaagccgg
ctgttgggcagttcagagaactgttcttctgttctcactttgcctcagctcactcaatac
gactgtgaggtgaatgctcctctacagggccgccagtatctgctacagggagaggagctg
ctacgagccctggaccatgtcaactga
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