Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110155294
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Entry
110155294 CDS
T05002
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03013
Nucleocytoplasmic transport
bpec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110155294 (srrm1)
03015 mRNA surveillance pathway
110155294 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110155294 (srrm1)
03041 Spliceosome [BR:
bpec03041
]
110155294 (srrm1)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110155294 (srrm1)
Spliceosome [BR:
bpec03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
110155294 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
110155294
NCBI-ProteinID:
XP_020775040
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKHKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITHQVTEIL
GFEDDVVIEFIFNQLEEKHPDAKMMQINLTGFLNGKNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIRLRQLEQEKLASLKKGDEERKEKDRAQSRSPRRRKTRSPSPRRRSPVKR
DRKRSPSRSPRPRHSPAPAVSPPPSMSTKALDPEPDTSGGLPEPVVQEASSTSDTTTEVV
KADSVTDAREPSPEKTQKKEERPKSREREKDGRRDRPHHRSRSHSRSRRRRSRSRSFSPR
RRQSPRRRLSPRRRSPPRRGPTSSRHRHRRSPVRRRRSRSASSSGSSSSGSQRKAMRKRV
LSSSPRKLLHHTGKSMSPAAKDQRSSSPMRRRARGSMSPPRSSGFKPGARNDSPSDNAKP
RQSEASESEDDKNDKGATADSVQQRRQYRRQNRQSSSDTGSSSSEDESPKRPTARPGARN
GDVRKRRSHTPSPRRRHRDPSPRKRRSLSPAGRRRRTPSPPRRRRSQSPRRRSPSPPPRR
RSPSPRRYSPPIQRRYSPSPLPPQKRKLSNSPRRLSPGAKRRPSRSPKRRGSPAQRRRTP
PSSTSPPRHRRSPAHLSTRSKRDSRPSPSPANRGRNLRGSASPRGRFETSPSSYRKQRSP
NNKAIRRVSRTPEPRSGQRASMSPQPVRRVSSRSRSVSPPPSAPKRPALMSASPSPSRSA
SASPPPAKKASSGSASQSPSKNSDVEVAGKKKKKKKEKKHKKDKKHKKHKKHKKEKAAAA
AADGQENQGAEEDVDSRKESESEVEDSLDDLEKHLREKALRSMRKAQLSPSQMS
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggggtttttccgcggcacaagtgctgagcaagataatcgtttcagcaacaag
cacaagaagctcctgaagcaactgaaatttgcagaatgtctcgacaagaaggtggacatg
accaaagtcaacctagaagtcatcaaaccttggattacccatcaagtgactgaaattctg
ggctttgaagatgatgtcgtcattgagtttatatttaatcaacttgaggagaagcaccct
gacgccaaaatgatgcagatcaacctaacagggttcctgaatgggaagaatgcacgagag
tttatgaaggacttatggcccctgctgcttagtgcccaggaaaacatagctggaatccct
tctgcttttctagaacaaaagaaagaagaaattagactgagacagctggaacaggagaag
cttgcttctctaaagaagggagatgaagagagaaaagaaaaagacagggcgcagtcaagg
agcccaaggaggagaaaaacaagatccccctcacctcgacgaagatctccagtgaagcgg
gacaggaagcgcagcccgtcgcgctctccgagacccagacacagtcctgcacctgctgtc
tctcctcccccatccatgtccactaaagcactggacccagagccagacacatctggaggt
ctgccagagcctgttgttcaagaagcatcttccacaagtgacacaactacagaggttgtg
aaagcagactctgtgactgatgctagggaaccatctccagagaagactcaaaagaaagaa
gaacgaccaaagtctcgtgaaagagagaaggatggaaggagggacagaccgcaccaccgc
tcccgctctcattctcgttcccggagacgcagatcccgttccaggtctttttctcctcgt
agaaggcagagccccagaagaagactttctccccgtcgaagaagcccacccagacgtggg
cccaccagctctagacacagacataggcggtctcctgttcgaaggaggcgctctcgatct
gcttcgtcatctggcagcagttcatctggttctcagagaaaagcaatgagaaaaagagta
ttaagttcgtcaccacgaaaactgttgcatcacacaggcaaatccatgagccctgctgcc
aaagaccaaagatcttcatctccaatgagaagacgagcccgtggctctatgtctcccccc
aggtcctctggttttaagccaggtgcacgaaatgattctccttcagataatgccaagccc
agacaatctgaagcttctgaatcagaagatgataaaaatgacaagggagcaaccgcagat
tcagttcaacagcggcgccaatatcgcagacagaatcgtcagtcatcctcagatacaggg
tcatcatcatctgaagatgagagtccaaagaggccgacagctagacctggtgctagaaat
ggagatgtcagaaaaagacgaagccatacaccatctccacgaaggcggcatcgcgatccc
tcaccaagaaaaaggcgttctttatcccccgctggacgtcggcgccgcaccccttctcca
cccagacgcagaaggtctcagtctcctagacgaaggtcaccttctccgcctcccagaaga
cgatctccttctcctagacgttactctcctcctattcagcgtcgctatagcccatcacct
ttgccgcctcaaaaaagaaaattgtccaattctccaagacgcctttctccgggggccaag
cgcagaccttcaaggtcacccaagcggaggggctctccagctcaaagacgtcgtacccct
ccctcctccacatctccacctagacacagaaggagcccagcacacctgtctactcgatca
aaaagggatagccgtccgtctccatctccagctaatcgtggccgaaatcttaggggttct
gccagtcctcggggccgttttgaaacctctccatccagctatcgaaaacagaggtctcca
aataataaggcaattcgaagagtctcccgaaccccagaaccacgtagtggtcagagagct
tccatgagcccacagcctgttagaagagtttcctcaagatctcgctctgtttctcctcca
ccaagtgctccaaaacgacctgcactcatgtctgcttccccatctccttcacgctctgca
agtgcttctccgccaccagctaagaaggccagcagtggttctgccagtcagtccccaagc
aagaattcagatgtagaagttgctggaaagaagaagaaaaagaagaaggagaagaaacat
aaaaaagacaagaaacacaagaaacataagaagcataagaaggagaaggcagcggcagct
gctgcagatggacaagagaatcaaggtgcagaggaggatgtcgattcacgaaaggaatca
gagagtgaagtagaggatagcctggatgacttggagaaacatttgagggagaaggcgcta
aggtcaatgagaaaagcccagttgtctccatcccaaatgtcctga
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