Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110155336
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Entry
110155336 CDS
T05002
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110155336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpec03021
]
110155336
03036 Chromosome and associated proteins [BR:
bpec03036
]
110155336
Transcription machinery [BR:
bpec03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110155336
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110155336
PBAF complex
110155336
GBAF(ncBAF) complex
110155336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
HEAT_GCN1
BRCT
BRCT_2
DUF919
Motif
Other DBs
NCBI-GeneID:
110155336
NCBI-ProteinID:
XP_020775094
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MATATTAASGAASGGPASGPVSGGTAVGRKKDGGPSSKFWESAETVSQLETVRLWIGKHY
KKYVQNDSPSSKSLAGLVVQLLQFQEDAFGRRVNNPALTKLPAKCFMDFKAGGALCHILG
SVYKFKSEQGWRRFDLQNPSRMDRNVEMFLNVEKNLVQNNCLTRPNVFLSPEIEQKQASK
LKDIIKRHQGSITDDKSKATHLIYPSPPQPEEEEWMRPVLKKDKQMLVHWGGFPDSYDTW
MSANEVDGDVEDPPSSDRPWKVHAKWVLDTDAFNEWMNEEDYEMDDNKKPFSFRQRIFPK
EEESSRTPDRKERKANSAGKKRRRSPSPPSTPAESRKKGGKKGNPGPHWKRRGQRGEEDD
TEEDLTKDLDDSSAGASVDEGMSKNSNSKKDDNAPMKGDLDDMEEDSMMSGGKDDEEQGK
GETNRLLDSGEDNVTEQTHHIIVPSYGAWFDYNWVHAFLEQWGLVNYQVDSESRPLPMGP
PPTPHFTVLADTPSGLMPLNHRPPTQIPPVPPMPNFGEKGKEKIDLQNFNLRSDLYAKKN
PKSKGSTTTREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYL
ESTESSLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAARAALEEFSRVREEVPA
DILEAHVKKVQEAARNTGKLDPTFGLETSGIAGTDPEEPEKTETSEGEKMDTDTDSQQGD
KAESKEEAEKPSESAEKPEKTESTDKVKKEGAEAADSSEKEDEEPEEEQEKESATDKDKE
DAMETSSSETEKDKEDKAASDEAEERRKKLVHDIGEGNIATAAAAALASAATKAKHLAAV
EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALELQRQQLLTERQAFHMEQL
KYAEMKARQQMEQAAAAAAAAQAQGQGPPQGPGPHPGPHPGPHPGQHPGPHPGPHPGPPP
PGMHPGGPPPHHGGPPPHHGAPPPHHGGPPPGAAMHPGYPPMGHHPMAPHHPGQTGPMGP
GQPMPGRMMAGPPSAGPPPGGMPPMMPPRHPGAPNGMYPGPPPAQPDAIPVAPVGPPAPP
GGRVSDN
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgaccacagcggcgagcggagcggcttcaggcggacccgccagcggcccg
gtcagcgggggaaccgcggtgggcaggaagaaagatggcggcccttcgtccaaattttgg
gagagtgcagagaccgtatcccagctggagacggttcggctttggatcggaaagcactac
aagaagtatgtccagaacgactctccctccagtaaatccctggccgggctcgtggtccag
ctgctgcaattccaggaagatgcatttggccgtcgtgtcaacaaccctgcgctcacaaag
ctccctgccaaatgtttcatggattttaaggcaggtggggctctgtgtcacatcctggga
tctgtgtacaagttcaaaagtgaacagggatggcgccgctttgaccttcagaatccctct
cgaatggaccgcaatgtggaaatgtttttaaatgtggagaagaacttggtacagaacaac
tgtttgaccagacccaacgtcttcctctcacctgagatcgagcagaaacaagccagtaaa
ctcaaagacatcattaagaggcaccagggttccatcactgatgacaagtcaaaagccact
cacctcatttacccctcccctcctcaaccagaagaagaggagtggatgcgtcccgttctg
aagaaagacaagcagatgctggtgcactggggcggcttcccagacagttatgacacctgg
atgtcggccaatgaggtggatggagatgtggaggatcccccgagctctgaccgaccatgg
aaggtccatgccaagtgggtgctggacacagacgcctttaatgagtggatgaatgaggag
gactatgagatggatgacaacaagaagcccttcagtttccgccagaggatcttccccaaa
gaggaggagtcttcccgtacacccgatcgtaaggagcgtaaggctaactctgcggggaag
aagaggaggcgctcgccatcgccccctagcacgccggctgaatcacgcaagaagggaggc
aagaaggggaacccggggcctcactggaagaggcgaggccagcgtggggaggaggacgac
acagaggaggacctgaccaaagacctggacgactcctctgcaggggccagtgtggacgag
ggcatgtccaagaactctaattcaaagaaggatgataacgctccaatgaaaggtgatttg
gacgacatggaagaagactccatgatgtctggtggaaaggatgacgaggagcagggcaaa
ggtgaaacaaaccgcctgctggactccggagaggacaacgtgaccgaacaaacccaccac
atcatcgtccccagctacggcgcctggttcgactacaactgggtgcatgcgttcctggag
cagtggggtttggtgaattatcaggtggattctgagagccgcccgctgcccatgggacct
ccccccacccctcacttcactgtgctggcagacacgccctctggactcatgcccctcaac
caccgaccaccaacgcagatccctccggttccgcccatgccaaactttggagagaaagga
aaagaaaagattgacctgcagaatttcaaccttcgctccgacctctacgccaagaaaaac
ccaaagagcaaaggaagcaccaccaccagagaatggactgaacaggagacactgctgcta
ctggaggctctggagatgtacaaagacgattggaacaaggtgtctgagcacgtgggctcc
aggactcaggacgagtgtatcctgcacttcctgcgtctgcccatagaggacccgtacctg
gagagcacagagagctccctgggccctctggcctatcagcccatccccttcagccagtcc
ggaaaccccgtcatgagcaccgtggccttcctggcctctgtggtcgacccccgggtggca
tctgctgctgccagggctgccctcgaggagttttctcgtgtgcgtgaggaagtgcccgcg
gacatcctggaggctcacgtcaagaaggtgcaggaggccgctcgtaacacgggaaaactg
gaccctacatttggcctggagacgagcggaatcgcaggaactgaccccgaggagccagag
aagactgaaacatccgagggagagaaaatggacactgacacagactcccagcagggtgac
aaggccgagtcgaaggaggaggcagagaaacccagcgagtctgcagagaaaccagagaaa
acagaaagcacagacaaagtgaagaaagagggagcagaggcagcagactcatcggagaag
gaggacgaggagcctgaggaggaacaggaaaaggagtctgctacagacaaggacaaggag
gacgcgatggagacctcctcctcggagacggagaaggacaaagaggacaaagccgcttca
gacgaggccgaggagaggaggaagaaactggtgcacgacatcggagagggcaacatcgcc
actgccgccgccgccgccctggcgtctgcagccactaaagccaagcatctggcagcggtg
gaggagaggaagatcaagtctctggtggcgctgctggtggagacgcagatgaagaagctg
gagatcaaactgaggcacttcgaagagctggagaccatcatggaccgcgagaaggaggcg
ttggagctgcagaggcagcagctgctcactgagcgtcaggccttccacatggagcagctc
aaatacgccgagatgaaggctcgccagcagatggagcaggctgcagccgccgcagctgct
gctcaggcacagggccaggggcctccacaggggcccggaccacacccagggccccaccca
ggacctcaccccggtcagcatccaggacctcaccctggaccccacccggggccccctcct
ccaggcatgcatccaggaggtccccctccacaccatggagggcccccacctcatcacggg
gcaccccctccccaccacggaggtcccccaccaggtgcagccatgcacccaggctatcct
cccatggggcaccacccaatggcaccccaccaccccgggcagacgggcccgatgggacca
ggccagccaatgccaggcaggatgatggccgggcctccctctgctgggcctcctcctgga
ggcatgcctcctatgatgcctcctcgccaccctggtgctcccaacggcatgtaccctggg
cctccacctgcgcaacctgatgctatccctgtagctccagtggggcccccagcgccccct
ggtggaagagtgtctgacaactaa
DBGET
integrated database retrieval system
