Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110155487
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Entry
110155487 CDS
T05002
Name
(RefSeq) probable histone deacetylase 1-B
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03082
ATP-dependent chromatin remodeling
bpec03083
Polycomb repressive complex
bpec04110
Cell cycle
bpec04330
Notch signaling pathway
bpec04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110155487
03083 Polycomb repressive complex
110155487
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110155487
04350 TGF-beta signaling pathway
110155487
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110155487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bpec03036
]
110155487
Enzymes [BR:
bpec01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
110155487
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
110155487
HDAC complexes
Sin3A-HDAC complex
110155487
BRAF-HDAC complex
110155487
REST complex
110155487
SHIP complex
110155487
MiDAC complex
110155487
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
110155487
Heterochromatin formation proteins
Other heterochromatin formation proteins
110155487
Chromatin remodeling factors
NuRD complex
110155487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
110155487
NCBI-ProteinID:
XP_020775252
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MALTSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
SGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSGGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTYETAVALDASIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEEEDPNKRISIRAHDKRIACEEE
FSDSEDEGEGGRRNVASYKKPKRPKTEGEKEGEEKEKKGQEETEEVKEEEKEPEDEKMDT
SKPKEESKTP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttacttcgcaaggaacaaagaaaaaagtttgctactattatgatggagacgta
ggaaattactactatggacagggacatcccatgaaacctcaccgaatccgtatgacccac
aacctgttactcaactatggcctgtacaggaagatggaaatctatcgtccgcacaaagcc
agtggagaagagatgacaaagtatcacagcgatgactacataaaatttctgcgttctatt
cgtccagacaacatgtcagagtacagcaagcaaatgcagagatttaatgtgggtgaagat
tgtccagtctttgatggattgtttgagttctgtcagctctcaggaggaggctccgttgct
ggtgctgtaaaactgaataagcagcaaacagacatcgccatcaactgggctggaggtcta
catcatgcaaagaagtctgaagcctctgggttctgctacgtcaatgacattgtccttgcc
atcttagagttactgaaatatcatcagagagttctgtacattgatattgatattcaccat
ggtgatggcgtggaggaagccttctacacaacagaccgtgtcatgactgtgtcctttcac
aaatatggagagtattttcctggcacaggtgacctcagggacattggtgctggtaaggga
aaatattatgctgtgaattacccactgagggatggcattgatgatgagtcctatgaagcc
attttcaaaccaatcatggccaaggtgatggagatgtaccagcccagtgcagtggtcctg
caatgtggagcagactctttgtcaggagacagacttggctgcttcaaccttacaattaaa
ggtcatgccaagtgtgtggagtacatgaaaagctttaacctcccattgctaatgctgggt
ggaggaggttacactattcgaaatgtggcacgctgttggacgtatgagaccgcagtggca
cttgatgcttctatccctaatgagctcccgtacaatgattactttgaatactttgggcct
gacttcaagctgcacattagcccctccaacatgacaaaccaaaatacaaatgattacttg
gagaagataaagcagcgtttattcgagaacttacgcatgctcccacacgcccctggagta
cagatgcaggccattccagaagatgctgtacaggaagacagtggagatgaggaagaagag
gatcccaacaaacgcatatcaatccgtgcccatgataagaggatagcatgtgaagaggaa
ttctctgactctgaagatgagggtgaaggaggacgcagaaatgttgcaagctacaagaaa
cccaagcgaccaaaaactgaaggcgagaaagagggggaagaaaaggagaaaaaagggcag
gaagaaacagaagaagtcaaagaagaagagaaggagccagaggacgagaaaatggacact
tcaaagcccaaagaggagtcaaaaacaccttga
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