Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110155517
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Entry
110155517 CDS
T05002
Symbol
scaf8
Name
(RefSeq) protein SCAF8
KO
K13191
RNA-binding protein 16
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpec03021
]
110155517 (scaf8)
03041 Spliceosome [BR:
bpec03041
]
110155517 (scaf8)
Transcription machinery [BR:
bpec03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110155517 (scaf8)
Spliceosome [BR:
bpec03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110155517 (scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110155517
NCBI-ProteinID:
XP_020775293
LinkDB
All DBs
Position
Unknown
AA seq
1375 aa
AA seq
DB search
MEAVKAFNNELYSLNEYKPPISKAKMTQITKSGIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGTEKDVFAPRFSKNIIVTFQHLYRCPPDDKSKIVRVLNLWQKN
AVFKSDIIQPLLDMAAGLPPPSVTPVMSSSAAPINNATPGTPATPATPANIVQGLPDWAS
QISNTDTVAAVAQILQSPQGQQLQQLVQSLQMQQQKPQPSLLQALDAGLVVQLQALTAQL
TAAATANTLNPLEQRVSSFNKKLLGPFDFGNDSERSDESKKDTSSQLPIVSEPSSLFHQL
AEQLQQQNLEQFQKQLLEHQQHQKTMGLESKDFGQDNNVATAQSSSQPQHSESEKLDDSI
DNQQEDMDLDEGPDGMEEEIVETEEKRHVSTRSRTRSRSRSRSPKRRRSRSRSGSRKRKH
RRRSRSRSRDRKRKSSRSYSSERRAREREKERQKKGLPPVRSKTLSVCSTTLWVGQVDKK
ATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYRARQKLSTGSFKIGSKIAWAL
NKGVKQEYKQFWDVDLGVTYIPWEKVKLDDLDGFAEGGIIDQETVNDEWEAAKNAETAKE
SAPQPVAVDTTPPTNPQAESFSQQVTMMPVQLPVAPAVPSAVGLVPPSFSVSMGIPPPGF
APPPFLRAGFNATQPPPGFLQTTQATAPTSLVQPSVTSSQDGVKDSPFGALIPPSSTIPG
NFMPSAIPGAGVFTPMGLQTQQAANEKAQSEGMDAAAELTLQGMQNAVRSGMGLLGMHPS
ASLTHPGLSPQRLPGLLPLDVRPNLLPGAGRFPLLMQPGLLDGSLQARPRAPFSQLDHFN
RAPNLNNESLPKTEDESSSGADEGKDQDYRFPPMEKPSTGLLRTPPPEQREPLGGPGSGR
PPLLQTPGTQPARSSLVGRLQALAGFTPDNRWSQTRGDFDERDRPTSAQNFPSRFDNRPG
GPSGPTQPWSRGAGPSAPFDSDLHQDLDERRRPWDRQRDRDERDFDFRREMNGGRHSRER
DRERERDRDRDRDRDRDRDRDRGRERPRETERERDKERDRDRGNWTPLLPLPTPLLPTPP
LNPNLALNPGKMLTPLKLNPQIPPRFQSPPLVQARPPLLGLNQPQPLVPTKSPPSAQSQE
PASEPPEERAVSPVPQNQSPALPQSPALTQSPALPQSPALSPENPAPLSQSSDFVPSPSE
SETPLQTVSPARPVTLSPPTIGSPESPALVQASSPPTEASQEASQEASQAASQEASQGTF
QEASEEASQDSYVTGLCEETNPSLKEDTMQEEHSQDDVGSPPPSWENGPGMDTSMAESTA
ESTAELCTDSAPTRGEEQQEQPGSPEDIVNNAQSESTEEAASQPVLDSVPDTEGT
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtcaaagcttttaacaacgagctgtactcgttgaacgagtacaaaccgccc
atctccaaggccaagatgacccaaatcaccaagtctggaatcaaggctattaaattctac
aaacatgtcgtccaaagtgtagagaagttcatacaaaagtgcaaaccagagtacaaagtt
ccggggctttatgtcatcgactctattgtcagacagtccagacatcagtttgggaccgag
aaggacgtctttgctccacgcttcagcaaaaatataattgtgacatttcagcatctctac
cgctgccctccagatgacaagagcaaaattgtgcgagtgctcaacctctggcaaaaaaat
gcagtttttaagagtgatattatccagccgctgttggacatggcagcagggcttcctcct
cccagtgtcaccccagtcatgtccagcagcgcggctcccatcaacaatgccactccaggc
acaccggccactcctgccacacccgccaatattgttcagggtctgccggactgggcttca
cagatctccaacacagacactgtcgctgctgtggcccagatcctacaaagtcctcaggga
cagcagctacagcagttggtgcagagtttgcagatgcagcagcagaagccccagccttca
ctgctgcaggctctagatgcaggtctggtggtgcagctacaagcactgacggcacagctt
actgctgcagccacagccaatactttgaaccctctggaacagagggtctcctcttttaac
aagaaacttcttggtccatttgactttggaaatgattctgagcgtagtgacgaatctaaa
aaagatacatcatcccaactgccaatagtgtcagagcccagctctctgttccatcagttg
gccgagcagctgcagcagcagaacctggagcagtttcagaagcagctcctggagcaccag
cagcaccagaagacaatgggtcttgaaagtaaagactttggccaagacaacaatgtagca
actgctcagagcagcagccagcctcagcattctgaatctgagaagttagacgattctatc
gataatcaacaagaggatatggatctagatgagggcccagatggaatggaagaagagatt
gtagagaccgaagagaagaggcatgtcagcactcgctcaagaacacgctctcgctctcgc
tctcgatctcccaaaaggagaaggtccaggtcgcgctcaggctctcgaaagcgcaaacac
cgaaggcgctctcgttctcgctcccgagaccgtaagaggaaatcctctcgctcctattcc
agtgagaggagagccagggagagggagaaggagagacagaagaaaggactgcctccagtt
cgttccaaaactcttagtgtgtgtagcacaactctgtgggtgggccaagtagataagaag
gcaacccaacaagaccttaccaacctctttgaagagtttggacagatcgaatctataaat
atgatccctcccagaggctgtgcctacatctgtatggtccatagacaagatgcataccgt
gcccgtcaaaaactcagcacaggctcctttaagataggttctaagattgcctgggccctt
aacaaaggtgtaaagcaggagtacaagcagttctgggatgtagacttgggtgttacctac
ataccttgggagaaagtgaagcttgatgacctggatggttttgcagaaggaggaattatt
gatcaggagactgtaaatgatgagtgggaggctgcaaagaatgcagaaactgctaaagaa
agtgcacctcagcctgtggctgttgacactacacctccaaccaacccacaggcagagagc
ttcagccagcaggtcaccatgatgcctgtgcagctccctgttgccccagctgtgcccagt
gcagtgggtttggtgcctccttcattttcagtgtcaatgggaatccctcctccaggcttt
gccccaccacccttcttaagggccgggttcaatgccactcagccccctccagggttttta
caaacaacacaggcaacagcacctacatcccttgtgcaaccttcagtcacttctagtcaa
gatggtgttaaagattcaccatttggtgcactgatccctccaagcagcactattcctggg
aacttcatgccttcagccatccctggagctggtgtgtttaccccaatgggacttcagacg
cagcaagctgctaatgagaaagctcagtctgagggcatggatgctgctgcagagctcaca
ctgcagggtatgcagaatgcagtgcgcagtggcatgggcctcctgggcatgcacccctca
gcgtctctcactcaccctggtctgtcaccacagcgcctccctgggctgctgcctttagat
gtgcgcccaaacctgctccctggagctgggcgcttcccccttctcatgcagccggggctt
ttagacggctccctacaggcccgacccagagcacccttctcccagttggaccattttaat
agagcccccaatcttaataatgaaagtttacccaaaacagaagacgagtcttcctctggg
gctgatgaagggaaagaccaagactaccgtttcccccccatggagaagccgagcactggg
ttattgcgcacccctcccccagagcagcgagagcccctgggaggccctggtagcgggcga
cctcccttactgcagacccctggtacacagccagccagaagcagcctagtgggcaggcta
caggctctagccggcttcacccctgataaccgctggagtcagaccagaggggactttgac
gagcgtgatcgccccacatcagcacagaacttccccagtcgttttgacaaccgtcctgga
gggccaagtggaccaacacagccctggagccgcggagctggtccctctgcaccttttgac
agtgacctccaccaagatttagatgaacgcaggcggccgtgggacagacaaagggaccgg
gacgagcgagactttgatttcagaagagagatgaacggtggtcgtcacagccgagagcga
gacagggaaagggaaagggacagagaccgagacagagacagagaccgagatagagaccga
gatcgaggtagagagcgccctcgggagaccgagcgcgagagggacaaagagcgtgacaga
gacagagggaactggactccccttctgcccttgcccacgcctctgcttccaactccacca
ctcaatccaaacctggctctcaacccaggcaaaatgttaacacctctgaaattaaaccct
cagattccaccacgcttccagtcccctccactggtccaggccaggcccccactcctgggc
ctcaatcagccacagcctttagttccaaccaaatcccccccttcagcacagagccaggag
cctgcatcagagccaccggaggagagagcagtttccccagtgcctcaaaaccagtctcct
gctctcccacaatctcctgctcttacacaatcccctgccctcccacaatcccctgctcta
tccccggagaatccagctcctttgagtcagtcttcagactttgtcccgtcaccgtctgag
tctgagacccctctgcagacagtgtcaccggctcgcccagtcaccctgtcccctccaacc
ataggttctccagaaagtccagccctggttcaagcctcttcccctcccacagaggcgtcc
caggaggcatcccaagaggcgtcccaagcggcgtcccaggaggcctcccagggaacgttc
caggaggcatccgaggaggcatcccaggactcgtatgtgacgggcctgtgtgaggagacc
aacccctctctaaaggaggacaccatgcaggaggagcactcccaggatgatgtgggctcc
cccccgccctcctgggagaatggacctggtatggacactagcatggctgaatccacagca
gagtccactgcagagctctgcactgactctgcgcccactagaggtgaagagcagcaggag
cagcctggctctcctgaggacatagtgaataatgcacagagtgagtccacggaggaagct
gccagtcagcctgtgctagactctgtcccagacactgaggggacataa
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