Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110155794
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Entry
110155794 CDS
T05002
Symbol
ncbp1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03013
Nucleocytoplasmic transport
bpec03015
mRNA surveillance pathway
bpec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110155794 (ncbp1)
09122 Translation
03013 Nucleocytoplasmic transport
110155794 (ncbp1)
03015 mRNA surveillance pathway
110155794 (ncbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110155794 (ncbp1)
03041 Spliceosome [BR:
bpec03041
]
110155794 (ncbp1)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
110155794 (ncbp1)
Spliceosome [BR:
bpec03041
]
Common components
Common spliceosomal components
Cap binding complex
110155794 (ncbp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
PHM7_cyt
CorA
AAA_11
DUF2115
CemA
AAA_13
MPS3_helical
CREPT
Motif
Other DBs
NCBI-GeneID:
110155794
NCBI-ProteinID:
XP_020775622
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEAD
LPNYKNKILRILCSVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKNNL
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRSDWFVYVVLSCLPWV
GKELYEKKDVEMDRLLNQIEGYLKRRVKTHVPMLQVWSAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPGHMPDAHYPMPRVLFRMFDYTDAPEG
PVMPGSHSVERFVIEENLNCIIKTHWKERKTCAAQLLSYPGKSKIPLNYHIVEVIFGQLF
QLPVPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCIDRLINWFSHH
LSNFQFRWSWDDWADCLTMDLEMPKPKFVKEVLEKSMRLSYHQRIVDIVPPTFSALIPAE
PLFIYKYADESSASLPGYPVSMTVQNAIKNKATNDEILSILKEVPNPNQEDDDDEGESFN
PLKIDVFLQTLLHMAAKSFSHSFSALGKFHEILKALTESDEGKLHILKVVYDVWRNHPQM
ISVLVDKMIRTQIVDCAAVANWLFSQDMAHEFTRLYIWEILHSTIRKMNKHVQKIQKELE
EAKDKLEKQQHKRVSAHLHRVFADQMMHVVLKRVCAPQRDSGDDEDMERTSEDEEAQLEE
QIERLQEKVESAQSEQKNLFLVIFQRFIMLLTEHLVRCETGSVDISTPWYKNCIDRLQQV
FLMHHQTIQQYMGTLENLLFTAELDPHILAVYQQFCALQL
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaagacggcacagcgacgagaatgacgggggacaacctcacaaaaggaggagg
acgtcggagcccatcgagatagaagaccgcctggagtctctcatatgtcgagttggagag
aagagcacatcctctctggagagtaacttggagggcctggcaggagtcctggaggccgac
ctgcccaactacaaaaacaaaatcctgcgcatcctctgctctgtggcgcggctgctgcct
gagaagctcacagtctacaccacactggtcgggctcctcaatgcacgcaactacaacttt
ggaggagagtttgtggaggccatgatacgacagctcaaagagacgctcaagaacaacctg
tacaacgaggctgtttacctggtgcgtttcctctctgaccttgtgaactgtcatgtgatc
gctgcgccctccatggtggccatgtttgagaactttgtcagtgtaactcaggaagaagac
gtgccccaggtgcgctcggactggtttgtctatgtggtgctgtcctgtctcccttgggtg
ggaaaagagctgtacgagaagaaggatgtggagatggatcgcctgctcaatcagattgag
ggctacctaaagagacgagtgaagacgcatgtgcccatgctacaagtatggtctgcagag
aagccccacccacaagaggagtacctggactgtctgtgggctcagatccagaagctgaag
aaggaccggtggcaggagcgtcacatcctgaggccgtacatcgccttcgacagtgtgctg
tgtgaggccctccagcacaacctgccgcccttcacccccccaggacacatgcccgacgct
cactaccccatgccccgtgtcctcttccgcatgttcgactacacggacgcgcccgagggc
cctgtgatgcccgggagccattctgtggagaggtttgtcattgaagagaacctcaactgc
atcatcaagacccactggaaagagcgcaagacctgtgcagcgcagttactcagctatcca
ggcaaaagcaagatccccctcaactaccacatcgtggaggtgatctttggacagctcttc
cagttgcctgtccctcctcacatcgacgtcatgtacaccacactcctcatcgaactgtgc
aaactgcagcccggatcactcccacaagttctggcccaggccacagagatgctctatatg
agactagacacaatgaacactacatgcatagacaggctcataaactggttctcacatcat
ctcagcaacttccagttccgctggagctgggacgactgggccgactgtctcaccatggac
cttgagatgcccaagcccaagtttgtcaaagaggttctggagaagagcatgagactgtcg
taccaccagcgcatcgtggacatcgtgcctcccaccttctccgctctcatccccgcagag
cccctcttcatctacaagtacgcagacgagagctccgcctctttaccaggttacccagtg
tccatgacggtgcagaacgccatcaagaacaaagccaccaatgacgagatcctcagcatc
ctcaaagaagtgcccaaccccaaccaggaggacgatgatgatgagggtgagagcttcaac
cctctgaagatcgacgtgttcctacagaccctgctgcacatggccgccaagtccttcagc
cactccttcagtgccctgggcaagttccatgagatcctgaaggcgctcacagagagtgac
gagggaaagctgcacattctcaaagtggtgtacgacgtgtggaggaaccaccctcagatg
atttcagttctggtggacaaaatgatccgcactcagatcgtggactgtgctgctgtggcc
aactggctcttttctcaggacatggcccacgagttcaccaggctctacatctgggagatc
ctccactccaccatccgcaaaatgaacaagcacgtgcagaagatccagaaggagctggag
gaggccaaggacaagctggagaagcaacagcacaagagggtgagtgcacatctccacagg
gtttttgcagaccaaatgatgcatgtggtcctgaaacgtgtgtgtgctcctcagagggac
agcggggacgacgaggacatggagcgcaccagtgaggatgaggaggctcagctggaggag
cagatcgagaggctgcaggagaaagtggagtctgcccagagtgagcagaagaacctgttc
cttgtcatcttccagagattcatcatgctgctgacggagcatctggtgcgctgtgagacg
ggcagtgtggacatcagcacgccctggtacaaaaactgcatcgaccgactgcagcaggtc
ttcctcatgcatcaccaaaccatccagcagtacatgggcaccctggagaacctcctcttc
acggccgagctcgacccacacatcctggccgtgtaccagcagttctgcgccctccagctc
tga
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