Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110155837
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Entry
110155837 CDS
T05002
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110155837 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpec03021
]
110155837 (smarcd1)
03036 Chromosome and associated proteins [BR:
bpec03036
]
110155837 (smarcd1)
Transcription machinery [BR:
bpec03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110155837 (smarcd1)
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110155837 (smarcd1)
PBAF complex
110155837 (smarcd1)
GBAF(ncBAF) complex
110155837 (smarcd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIFT
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
110155837
NCBI-ProteinID:
XP_020775666
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MAARGGFQSAPTGGGGGPMGPGPPVPGAGPGMGPGTPSGRMGPGGPAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPGYGGSPVSRPGMPGVMDPSRKRPAPQQIQQVQQQSRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDSAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLD
NKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEF
YYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggctagagggggctttcagtcggcaccaaccggaggaggcggcggtccgatgggt
ccagggcctccagtgccgggtgctggaccgggcatggggccggggactccctccggacgg
atgggaccaggcgggccggcgcagaaccacatgtaccgctctccgatgcctgggcctggg
tacccgagaccaggcatgcccccttccagcagaatgaccccacagggaccagccatgggg
cctccaggatacggggggagccctgtgtctcggcctgggatgcctggagttatggatccc
tcccgcaagagacctgctccccaacagatacaacaggtgcagcagcagagcaggaaccag
cacacaaagaagaagaagatggctgataaaattctacctcagaggattagggaactagtc
ccagagtctcaggcttacatggatctgctggcgtttgagaggaagctggatcagaccatc
atgcgcaaaagactggacatccaggaagctctcaagaggcccatcaagcaaaaaagaaag
cttaggatcttcatatccaacaccttcaacccggccaaacctgacgctgaggacggagaa
ggcactgttgcctcctgggagctgcgagttgagggacgtctgctcgaagattctgctgtg
tccaagtacgaggccaccaaacagaagagaaagttctcttcttttttcaagtctctggtg
attgagttggacaaggatctgtacggtccagacaatcacctcgtggaatggcacaggacg
gccaccacccaggagacagatggtttccaggtgaagcgtcctggagatgtgggcgtgcgc
tgtactgtgctgctcatgttggactatcagccccctcagttcaaactggacccccgcctg
gcccgtatgctgggcatccacacccagactagacccgtcatcatccaggctctgtggcag
tacgtcaagacccacaagctacaggacccccacgagagggagttcatcaactgtgacaag
tatctgcagcagatatttgaaactcagcggatgaagttctcagagatcccacagcgcctg
catgccctcctcatgcccccagaaccaatcatcatcaatcatgtgatcagtgtcgaccca
aatgaccagaagaagacggcgtgctatgacattgacgtggaggtggacgacacgctcaag
actcagatgaactctttcctgttgtccacggccagtcagcaggagatcgctgggctcgat
aataagatccacgagacgattgagactataaaccagctgaagacgcagagggagttcatg
ctgagttttgctcgagatcctcagggcttcatcaacgactggctgcagtcccagtgcaga
gacctcaagaccatgactgatgtggtgggaaaccccgaagaggagagaagagcagagttt
tactaccagccctgggctcaggaagctgtttgccgctacttttactccaaggtccagcag
aggagacaggagctggagcaggcacttggcatcaggaacacttag
DBGET
integrated database retrieval system
