Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110156227
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Entry
110156227 CDS
T05002
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110156227 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpec03021
]
110156227 (smarca5)
03036 Chromosome and associated proteins [BR:
bpec03036
]
110156227 (smarca5)
Transcription machinery [BR:
bpec03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
110156227 (smarca5)
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
110156227 (smarca5)
RSF complex
110156227 (smarca5)
WICH complex
110156227 (smarca5)
B-WICH complex
110156227 (smarca5)
NORC complex
110156227 (smarca5)
BRF complex
110156227 (smarca5)
NuRF complex (fruit fly)
110156227 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
AAA_14
Motif
Other DBs
NCBI-GeneID:
110156227
NCBI-ProteinID:
XP_020776087
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MSESPSTEEQREEQTELDEAGGAEENAGADGPDASSSSFSPSKASSAGYEEKVKTDRTNR
FEYLLKQTELFAHFVQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSAGDNRHRRTEQEED
EELLNESTKTTNVCTRFDESPSYVKTGKMRDYQIRGLNWLISLYENGINGILADEMGLGK
TLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRAVCLIGDRDQRTALI
RDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTN
RLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLVERLHTVLRPF
LLRRIKADVEKSLLPKKEIKMYIGLSKMQREWYTKILMKDIDILNSAGKTDKMRLLNILM
QLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRV
LDILEDYCMWRNYGYCRLDGQTPHEERQISINVFNEPNSSKFLFMLSTRAGGLGINLATA
DVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRFITENTVEERIVERAEMKLRLDSIV
IQQGRLVDPSANKLGKDEMLSIIRHGATHVFSSKESEITDDDIDAILERGEKKTAEMSEK
LSSLGESSLRNFTMDTEGSSVYTFEGEDYREKKKVITNWIEPPKRERKANYAVDAYFREA
LRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGYKVPRNPELPNSAQ
VQKEEQSKIDEAETLTEEELEEKENLLQQGFTAWNKRDFNQFIKANEKWGRDDIENIARE
VEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDSKIGRYKAP
FHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCIRNSPQFRFDWFLKS
RTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPKTGSAQKRKSEGTPDGRGRKKKL
KL
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaagcccgtccaccgaagaacagcgggaggaacagactgaacttgatgaagcc
gggggagctgaggaaaatgctggtgctgatggacccgatgcctcctcttcctccttctcc
ccatccaaagcatcctcagcgggctatgaagagaaagtgaaaaccgatcggacgaacagg
tttgaatacctgttgaagcagactgagttgttcgctcacttcgtccagccggccgcacag
aagacccccacgtcccctctgaagatgaaaccggggcgcccacgcatcaagaaagacgag
aaacagaacctgctctcggccggagacaaccgtcatcggcgcacggagcaggaagaagac
gaggagctgctgaacgagagcaccaagacgaccaatgtgtgcacgcgcttcgacgagtcc
ccctcttatgtgaagaccggaaaaatgagagactaccagatccgcggtttgaactggctc
atttctttatatgaaaatggaattaacggcattctcgctgatgaaatgggtttggggaaa
actttgcagacgatttctttattggggtacatgaagcattacagaaacatccccgggcct
cacatggtgctcgtgcccaagtccaccctctacaactggatgaacgagttcaaacgctgg
gtgccctccctgcgcgcagtgtgcctcataggagaccgagaccagaggactgcactgatc
agagatgtgctgctgcctggagaatgggatgtgtgcgtaacatcctacgaaatgttgatc
attgaaaaagcagtgttcaagaagtttaactggagatacctggtcattgacgaagctcac
agaatcaagaacgagaagtcaaagttgtctgaaatcgtgcgagagtttaagaccacaaac
cgtttgcttctgaccggaaccccgctgcagaacaacctgcacgagctgtgggcgctgctc
aacttcttactgccagacgtcttcaactcctctgaggattttgactcgtggtttgacaca
aataactgcctgggagatcagaaattggttgaacgtcttcacactgtgttgcgtcctttc
ttgttgcgtcgtatcaaagctgatgtagaaaaaagtcttttgccgaaaaaagaaatcaag
atgtacatcggcctgagtaagatgcagcgagaatggtacacaaagatcctgatgaaggac
attgacattctgaactcggccggtaaaacggacaagatgcgtctgctgaacatcctgatg
cagctgaggaagtgctgtaatcacccgtacttgttcgacggagcggagcccggacccccc
tacaccaccgacctccatctggtcgtcaacagcggcaagatggtggtgctggacaaactg
ctgcccaaactcaaggagcaagggtcccgtgtcctcatcttcagtcagatgaccagggtg
ctggacatcttggaggattactgcatgtggaggaactacggctactgtcgcctggacggt
caaacgcctcacgaagaaagacagatctctatcaacgttttcaacgaacccaacagcagc
aagtttctcttcatgttgagcaccagagccggaggtctgggcatcaacctggccacagcc
gacgtcgtcatcctgtacgactccgactggaacccccaagtggatctgcaggccatggac
cgagctcacaggatcggtcagcagaagcaggtgcgtgttttcagattcatcaccgagaac
acagtggaggagaggatcgtggagagggctgagatgaagctgcgattagactccattgtg
atccagcaaggacgactggtggacccgagcgccaacaaactgggcaaagatgagatgctg
tcgatcatccgtcacggagccacacacgttttctcctctaaagagagcgagatcacggat
gatgacatcgacgccattctggagagaggagagaagaagacggcggagatgtcggagaaa
ctgtcgtctctgggtgaaagctctttgaggaacttcaccatggacacggagggcagcagc
gtctacacgtttgagggggaagactacagggagaagaaaaaggtcattaccaactggatc
gagcctcccaaaagagaaaggaaagccaattacgctgtggacgcttactttagagaagct
ctgagagtcagtgagcccaaagcccccaaggctccaagacctcctaagcagccaaatgtc
caggacttccaattctttccaccacgactttttgagctcctagaaaaagaaattctcttc
tacagaaagacgattggctacaaggtccctcgtaacccagaattgccaaactcagctcag
gttcagaaagaggagcagtccaagatcgatgaggcagaaacgctaacggaagaggaacta
gaggaaaaggaaaatctgctacaacagggctttaccgcatggaacaaacgcgacttcaat
cagttcatcaaagccaacgagaaatggggacgtgatgacatcgagaacatcgccagagag
gtggagggtaaaactcccgaagaggtcatggaatattcagctgtcttctgggagcgctgc
aacgagctacaggacatagaaaagatcatggctcagatcgagagaggagaagccaggatt
cagagaaggatcagcatcaagaaagcactggactcaaagatcggccgctacaaggctcca
ttccatcagctccgcatatcgtacggcacaaacaaaggcaagaactacacggaagaggag
gaccgcttcctcatctgtatgctccacaaactcggcttcgacaaggagagtgtctacgac
gaactgcgccagtgcatccggaactcgccgcagtttcgctttgactggttcctcaagtcc
aggacagccatggagctgcaaaggcgctgtaacacactgatcacactaatcgagagggag
aacatggagctggaggagagggagaaggcagagaagaagaagagaggaccaaagactgga
tctgctcagaagaggaagtctgaagggaccccagatggacgcggacgcaagaaaaagctc
aagttgtga
DBGET
integrated database retrieval system
