Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110156410
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Entry
110156410 CDS
T05002
Name
(RefSeq) CCR4-NOT transcription complex subunit 8-like
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110156410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110156410
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110156410
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110156410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
EKR
Trimer_CC
Motif
Other DBs
NCBI-GeneID:
110156410
NCBI-ProteinID:
XP_020776271
LinkDB
All DBs
Position
Unknown
AA seq
285 aa
AA seq
DB search
MPAALTDSSQIICEVWASNVEDEMRKIRAIIQNYNYIAMDTEFPGVVVRPIGEFRSTVDY
QYQLLRCNVDLLKIIQLGLTFMNEDGDYPAGTTTWQFNFKFNLTEDMYSQDSIDLLQNSG
LQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDARLPEEEHD
FFQILNLFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR
MKELFFEDNIDDAKYCGRLYGLGSGTSQTQNGLSTSNQEDPNNKH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccggcggcgctcaccgactcgagccagatcatctgcgaggtttgggccagtaacgtg
gaggatgagatgcgcaagatcagagccataattcagaactacaactacattgcaatggac
acagagtttcctggcgtggtggtgcggccgatcggtgagtttcgcagcaccgtggactat
cagtaccagctcctgcgctgcaacgtggacctgctcaagatcatccagctcggactgacc
ttcatgaacgaggacggagactacccagcaggcaccaccacctggcagttcaacttcaaa
ttcaacctcacagaagacatgtactcccaggactccatagatctgctgcaaaactctggt
ctccagttcaaaaaacacgaggaggagggaattgacacgctgtactttgccgagctgctc
atgacctcagggctagtcctgtgtgaaaacgtcaagtggctctcctttcatagtggttat
gatttcggatacctggtgaagctgctcacagatgcccgactgcccgaagaggagcatgac
ttcttccaaatcttaaacctgttttttcctgccatttatgatgtcaaatatctcatgaag
agctgcaagaacctcaagggagggctacaggaagtggcagatcagctggagctaaagagg
attggccgacagcaccaggccgggtcagactctctgctcacagggatggccttcttcagg
atgaaagagcttttcttcgaggacaacattgatgacgccaagtattgtgggagattgtac
ggtttgggatcgggcaccagtcagacacaaaatggcctctcgacgtcaaaccaggaagac
cccaacaacaaacactga
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