Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110156720
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Entry
110156720 CDS
T05002
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110156720 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110156720 (thoc5)
03041 Spliceosome [BR:
bpec03041
]
110156720 (thoc5)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110156720 (thoc5)
Spliceosome [BR:
bpec03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110156720 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
110156720
NCBI-ProteinID:
XP_020776591
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSSDLKKRKSKVVRSEGGTPETKRGRTEGEQQDVRIYNEEVELDSRDPEQDYAQYKESCE
SLSTLMAEIQELKANGAKEGSPEVEQRRMQSCIHFMNLKKLNRLAHMRLKRGRDQTHEAK
QKVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVTEDVFYEEAPPEISRPHLTS
NDQHQLTLARLDWELEQRKRLAEKYKESLTTKEKIQKSIEVKKEHLASLQPGLNAIMQAS
LPVQEFLSMPFEQTQKQTEIARHLPPPLYVLFVQANAYGQACDNNLSVSINGDVDEAKAL
SKPPEDSQDDESDSDAEEEQEKTKRRRATTGGQLEEKRREMLKRHPLSVCIDLKCKDGSV
LHLYFFYLMNLNIMTVKTKVTTPTDLSTAISAGELLRSDTLLSCLYVGDQGGETPNPANR
YQFDKVGIVSFVDYVDELGHPYMWVQNLGGLHFPSDGSESVCVGSSLSASHMEATMKFLR
ARVQSRLALQKQFASLEHSIIPVSIECQNLVPAKIITRLARWTTIAYQDYLEFPYTKHVT
EAGLAKDTDLYFMGVVERGTARLHAAVVMSPRYPEIAPLFSLSLNWKGERTGRTDDNLRA
IESEVNMFKHELQGPRPGYQLFTNQMARLCMCLDVYLETEGQDDSVEGPREFPREKMCLR
TVRGPNRLKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagacttgaagaagcgaaaatctaaggtcgtccgcagtgaaggagggacacca
gaaacgaaacgcggacgtaccgaaggagaacagcaggatgttcgtatttacaatgaggag
gtggagctggacagtagagaccctgaacaggactatgctcagtacaaagaatcttgtgaa
agcttgtctacactcatggcagagatccaagagctgaaagccaatggagccaaagaaggg
tctcctgaggttgaacagagacgtatgcaaagctgtattcattttatgaacttgaaaaaa
ctcaatcgacttgctcacatgcgactgaagagaggccgagaccagactcatgaggctaaa
cagaaagtagatgtccttcaccttcagttgcagaatctcctttatgaagttatgcatctt
cagaaggagataagcaagtgtttggagttcaagtcgaaacatgaggagattgatttggtg
actgaggatgtgttctacgaagaggccccaccagaaatttcaaggccacacctcacaagt
aatgaccagcatcaactcacattagcacgcttggattgggaactggagcaaagaaaaaga
ctggcagagaaatacaaggaatcactaactacaaaggagaagattcaaaagagcattgaa
gtgaagaaggaacatttggcaagcttgcagcctggactcaatgccattatgcaggcctca
ctcccagtgcaggagtttctgtcaatgccttttgaacagactcagaaacagacagagatt
gcacggcacctgcctccacctctctatgtcctctttgtccaagccaatgcatatggccaa
gcctgcgataacaacctttctgtctccatcaatggggatgtggatgaggccaaagccctt
tctaaaccccctgaagattctcaagatgatgaaagtgattcagatgcagaagaggagcag
gagaaaactaagaggagaagagccacaaccggtggtcagctagaagagaaaagacgggag
atgctgaaacgacatcctctctctgtttgcattgatctcaagtgtaaagatggcagtgtc
cttcatctttactttttttacctgatgaatctaaatataatgactgtaaagaccaaagtt
acaacacccacagacctcagcacagccatcagtgcaggagaactgttgagatcagacaca
ctcctcagctgtctctatgttggggaccagggtggggaaacaccaaatccagccaatcgc
taccagtttgacaaagtcgggattgtttcttttgtagactatgttgatgaactgggtcat
ccctatatgtgggtgcaaaatctaggtggattacattttcccagtgacggttcagagagt
gtgtgtgtgggcagttctttgagcgctagccacatggaagccaccatgaagtttctgaga
gcacgggtccagtcccgcttggctctgcaaaaacaatttgcatctttagaacacagtatt
attccagtttcaattgagtgccaaaaccttgtaccggcaaagattattactcgtttagct
cgctggaccaccattgcctatcaagactatttggaatttccttatacaaaacatgtgact
gaagctggcctggcaaaagatactgacctgtacttcatgggtgtagttgagaggggcact
gctcgtcttcacgccgcggtggtgatgagtccacgctatccagaaattgccccactcttc
tctctgtcgctcaactggaagggagaacgtactggacgcacagatgacaacttaagagca
atagaaagtgaggtgaatatgttcaaacatgagctgcagggccctcgtccaggttaccaa
ctcttcaccaaccagatggctcgcctgtgcatgtgtctggatgtgtatttggagacagag
gggcaagatgatagtgtggaggggccaagagagtttccacgtgaaaagatgtgtctccga
actgtcaggggccccaatcgtctgaaaccattcaagtacaatcatcctcaaggtttcttc
agtcatcgctaa
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integrated database retrieval system
