Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110156773
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Entry
110156773 CDS
T05002
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110156773 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110156773 (hbs1l)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110156773 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
110156773
NCBI-ProteinID:
XP_020776689
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDMYGQSVEDDYCISPATANQFIYSRRELQAPKEETLEEEEY
EDDDVPMSPTVNHNLDPLDQAKLYSCLDHMRTVLGDALPESVLSEAAMKHRFDPQKALDA
VLSGDSKTAPVPKSTSEDVARVSMDMAPLPQRVKREPASEKAKRDVSQNKMESEVVPKVA
RMTVSGKKQTMGFDVPSTDENGISAVRRGGSPENAVVTSAPEPKPPETPSKGNGEETTTT
PTPSKSSSKNRQAINVKAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRT
MHKYEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSKVVTLMDAPGHKDF
IPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVAVNKMDQV
NWQEERFKDITSKLGHFLKQAGFKESDVFYIPTSGLSGENLTTRSTVSELTSWYSGPSLL
EQIDAFKAPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYVQTGDRILAMPPNETCTV
KGITLHDEPLDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIRACTRFRARILLFNIE
FPVTQGFPVLLHYQTVSEPATIKKLISVLHKSSGEVLKKKPKCLSKGMNAIVELQTHRPV
ALELYKDYKELGRFMLRYTGSTIAAGVVTEFKE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcacagaaatgtccgaggttacaactatgacgaagattttgaagatgatgac
atgtatggacaatcagtggaggatgactactgcatatctccagcaacagcaaatcagttc
atttattcacgccgagaattgcaagcaccaaaagaagagacgctagaggaggaagaatat
gaagacgacgatgtccccatgtccccaactgtcaaccacaaccttgaccctcttgatcaa
gccaagttgtattcctgtctggaccacatgcggactgtgctgggagatgcattgcctgaa
tcagtcctgagtgaagctgctatgaaacacagatttgacccgcagaaggcgctggatgca
gttctgtccggagactccaaaacggcaccagttcctaaaagtacaagtgaagatgtggcg
agagttagtatggacatggcccctctaccacagagagtcaaaagagagcctgcatctgaa
aaagctaaaagagacgtttctcagaataagatggagtcagaggttgttcctaaagttgcc
cgcatgaccgtctctggaaagaagcagaccatgggctttgacgtgccgagcacagacgag
aatggcatcagcgcagtgcgtagaggaggcagccccgaaaacgccgtagtaacgtctgca
ccggagcccaaaccgccagagaccccctccaaagggaacggagaggagaccaccacaaca
cccacccccagcaaatcctcaagcaaaaacagacaagcaatcaacgtcaaggcggaacta
gagaagagacaaggaggaaaacctcttctaaacttagtggtgataggtcatgtggatgca
ggtaaaagcacactgatgggacatttgctctatctcctgggtaacgtgaacaagcgcacc
atgcacaagtacgagcaggagtctaagaaggcgggaaaggcctcattcgcctacgcttgg
gttctggatgaaactggcgaagaacgtgacagaggagtgacgatggacgtgggcatgacc
aagtttgagacaaattccaaggtggtaacactgatggatgcccctggacacaaagacttc
attcccaacatgatcacaggagctgcccaggctgatgtggcagtgttggtggtggatgcc
agcagaggggagtttgaggcggggtttgaggctgggggacagaccagagaacatgcactg
ctggtccgatcacttggagtcactcaactggctgtggctgttaacaaaatggaccaggtt
aattggcaagaggagcgcttcaaggacatcacgtccaagctgggccactttctgaagcag
gcaggcttcaaggagtcagatgttttctacatcccgaccagcggcctgtcaggagagaac
ttgaccacgaggagcactgtgtcagaactcacatcctggtactcagggcccagtctgctg
gagcaaattgatgccttcaaagcccctcagaggtccattgacaaaccatttagactctgt
gtgtctgatgtgttcaaagaccagggctcaggcttctgtgtaactgggaagatagaggct
ggttatgttcagactggagacaggatcctggccatgccccccaacgaaacctgcacggtc
aaagggataacgctccatgatgagcctttggactgggctgcagcaggagatcatgtcagc
ctgacactcacagggatggacatcattaaaatcaatgttggctgtgtgttttgtgatccc
aaggagccaatccgagcctgcaccagattccgtgcacgcattctcctcttcaacatagaa
tttcccgtaactcaaggcttcccggttttgctgcattaccaaactgtcagtgaaccagcc
accatcaagaagctgatcagtgttttacataagagcagtggtgaggtcctcaaaaagaaa
ccaaagtgtctgagcaaaggcatgaacgccatagtagagctccagacacacagacctgtg
gcattggagctgtacaaggactacaaggaactgggccgctttatgctgcgctacaccggc
tcaaccatcgctgctggggtcgtcacggagttcaaagaatga
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