Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110156912
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Entry
110156912 CDS
T05002
Symbol
ddx43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpec03041
]
110156912 (ddx43)
Enzymes [BR:
bpec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110156912 (ddx43)
Spliceosome [BR:
bpec03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110156912 (ddx43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
KH_PNO1_2nd
KH_2
CMS1
KH-I_KHDC4-BBP
SNF2-rel_dom
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
110156912
NCBI-ProteinID:
XP_020776803
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MSDWEDEYNEHGVAIHKNRTKPAPATWDVPHKGRERENISFGFKSGRRFVTPSDGRSESY
IHSDSQEQRWRSEGPPRHGRDHGAPSRRPFRDGAESRTVTINVDNALVGRVIGRGGSKIH
ELEERSGARIKINKGDYEGEVSIFGPPSAQQKAKEMIEELVSDGFSQRRDGNDYGGEGGD
CSVWSSSQLKSAEVAPPRPQIDWNSIRENKDKFEELKWEGLPPLKKYFYKECKSVSMLTA
EEVSEWRKGNNNIFVDDLKEEGEKRQILNPCRTFLEAFEHYPEIMENIERVGFVKPTPIQ
SQAWPVLLSGEDLIAIAQTGTGKTLAYLLPGFIHMDGQPVPKSERGGPGMLVLTPTRELA
LQIEAECGKYQYKDYKSICIYGGGDRRGQINMVKAGVDIVIATPGRLNDLQMNELINLRS
ITYLVLDEADRMLDMGFEPQIMKIILDIRPDRQTVMTSATWPSGVRRLAKSYLKNPMMVY
VGTLDLAAVNTVKQNIVVLAEDEKKAFLLDFIRDMKPDDKVIIFVGKKIIADDLSSDMCL
KGLAVQSLHGDREQCDREEALKDFKNSRVRILVATDLASRGLDVTDITHVFNFDFPRNIE
EYVHRVGRTGRAGRSGTAVTLVTRDNWRMAPELIHILERAGQEVPTELVLMAERYEKHKR
EREMFPREGRGGGRGVAGGGRRGGWRDGGERRDGGRRDREPNWGF
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactgggaagatgaatacaacgaacatggcgttgcaattcacaaaaacaggact
aaaccggctcctgctacgtgggatgttccacacaaaggtcgggaaagggaaaacatttct
tttggctttaaaagtggcaggagatttgttaccccgagcgatggacggtctgaaagctac
attcatagtgattcccaagagcaaaggtggagaagtgaggggcctccgaggcacggccgg
gaccatggagctccttctcggcgaccgttcagagacggagcggagtccaggaccgtcact
attaatgtggataatgctttggtcggcagagtcatcggacgaggagggagcaagatccat
gaacttgaggagcgctctggtgctagaatcaagatcaataaaggagactatgaaggtgaa
gtgtccatatttggccctccctctgcccaacaaaaagccaaggaaatgattgaagaactt
gtgtcagatggcttttcacagaggcgcgatggaaatgactatggtggtgaaggaggagat
tgctctgtttggtcaagttcccagttgaagtctgcagaagtggccccaccccgaccacag
attgactggaactccattagagaaaacaaggataagtttgaggaactgaagtgggagggc
ctgccaccattaaaaaaatacttttacaaagagtgcaaaagtgtatccatgctgacagct
gaagaagtcagcgagtggaggaagggcaacaacaatatttttgtagatgatctaaaggag
gaaggagaaaaacgtcagattcttaatccctgccgtacattccttgaggcttttgagcat
tatccagaaattatggagaacattgagcgtgttggctttgttaaaccgacccctatacag
tcacaggcatggcctgtgttgctatctggagaagacctcatagccattgcacagacagga
acggggaagacactggcatacctgctgcctggatttattcatatggatggacagcctgtt
cctaaatctgagagaggaggcccaggtatgttggttttgactcccacgagagagttggca
ttacagattgaggcagaatgtggcaagtatcaatacaaggactacaagagtatctgcatt
tatggaggaggggacagacggggtcagatcaacatggtcaaagccggagtggatattgtg
attgccacaccaggtcgactcaatgatctacaaatgaatgaactcatcaatctacgctcc
atcacttatttggttcttgatgaagcagaccgaatgttggacatgggttttgaaccacag
attatgaagattatcctagacatcaggccagatcgacagactgttatgacaagtgccacc
tggccctctggagttcgacgactggccaaatcttatctgaaaaatcccatgatggtttat
gtgggcacactggacttggcagccgtcaacactgtgaagcagaacattgttgttcttgct
gaagatgagaagaaggctttcctgttagattttatcagagacatgaagccagatgataaa
gtcattattttcgttggcaaaaagatcattgcagatgatctgtcgagtgacatgtgtctg
aagggtcttgcagttcagagtctccatggtgaccgtgagcagtgtgaccgtgaagaggca
ctcaaggattttaaaaacagcagagttcgtatcctcgtggccactgaccttgcatcgcgt
gggttggatgtaacagacatcacacatgtcttcaactttgactttcctcgaaacatagag
gagtatgttcatcgcgtgggccgcacaggcagagctgggcggtcaggtactgctgttacc
ttggtgaccagagacaactggaggatggccccagagttgattcacattctcgagcgagct
gggcaggaggtccctacagaattggtgctgatggctgaaaggtatgagaagcacaagcga
gagagggagatgtttccacgagagggacgtggaggaggaagaggagtagcaggtggagga
agacgggggggctggagagacggaggagagaggagagatggaggtcgcagagatcgggaa
ccaaactggggattctga
DBGET
integrated database retrieval system
