Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110156981
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Entry
110156981 CDS
T05002
Name
(RefSeq) collagen alpha-1(XVII) chain-like
KO
K07603
collagen type XVII alpha
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110156981
BRITE hierarchy
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GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
110156981
NCBI-ProteinID:
XP_020776874
LinkDB
All DBs
Position
Unknown
AA seq
2019 aa
AA seq
DB search
MERLTGGMDFSTGMSEERVVTDTVTSKSRLTSLPPKGTGGSNHRIMSTGAGGLGLEKNVL
TQNTSGTYFSSSSVGVSSSTYASSSGVYLSGDSSGGGDGVGGFLDVESYGSGGGGGGGGG
AGGGGGSSYMVSSTSVSKVRSSSSTGGGRRTQTASSSGGVSPSTFRERKAVSSRSGGYDG
SSSANSSPEFTRKDYGNYCAGNSRGRSESRESEIRARLQSASPSATRWTELDDVKKLLKG
RSSSVSPTRSSSASITLPVPKKTTAEPKTVSVATQSVSSMFDTGLRSDQFIDTTGLYDNT
ISFGQYSGSVKSGQYDTGLKTSAYDVSVRSGQYDSGVKAGTYSGSLASGQFDTMNGYKSS
QYDMSLKSGHYDLGLKTDHYDSGVKLSQYDIGVKSGHSTIRSAQYDNATVDAALPAFTWS
TATLPSQSAPAVSATSYSYQISTNNMGGSVPLSPASPSSLSVYGFQNNLGPTSGSVLTTS
GANTSASLGGYGVQKNMSSGAVLGSAVSTGTRSQTEDSYKRFVAADKENFSAKRDGETLI
LAKDSGKQFTSGSSVHIGGGSLSGDSIKKEKLISSYGETTQLKADLGQSYYGSSGVLMKD
KATYAEIRRDSGVFGGGGFCCCSDSCCSWWKWLLGLLLLGLLLLGLLFGLIALAEDVRKL
KNRVATLEAEAAVTSARTSRFSGGNEINNYVDGAGGAGSSTDTKLYIGGGAIGTGGGGAT
AGAGTAAGAGGATGAGGATGTGTSTDTRVGVGVGVGAGGTAGGKAGGVAGGTSGTGAGGV
TVVGGGGTTGGGAGSAGGAVGGGTGGGGSNGAGNTIIYFGGGGGTSGGTGTGTVTDTRSR
YTESSSGTSYSGTSYTGSTSYGGGSAGGAGFTWSGGQLDAATLQSAILNMLRTELQSQAF
RAYLVSSVQGERGLPGPKGGVAGGTSGTGAGGVTVVGGGGTTGGGAGSAGGAVGGGTGGG
GSNGAGNTIIYFGGGGGGTSGGAGTGTVTDTRSRYTESSSGTSYSGTSYTGSTSYGGGSA
GGAGFTWSGGQLDAATLQSAILNMLRTELQSQAFRAYLVSSVQGERGLPGPKGDPGLKGE
TGYPGIPGPMGHAGPEGPKGQKGSMGEAGPEGPPGIRGREGPPGPRGEPGPHGFGEKGDK
GAAGEPGVAGIMGPVGPKGIVGSPGHVGPPGQPGVQGFRGEPGLPGLKGDRGLPGFQGLK
GEPGDKGPRGLPGDIGVPGVPGPAGEKGPKGSMGLSGQDGAKGSRGDQGPVGPPGLRGPA
GPPGDAGLPGQPGLQGPPGVAGIPGRPGIKGEPGEPGRIINAAGSTSVGIPGPPGPSGPP
GPAGPPGLSGPIGPAGLPGQTGPKGDKGDKGEPGVSVTTSETISSSRTQSQYSASGASGV
VGPPGPPGPPGPPGRPGDSRQGPPGPPGPPGQPGYGRPGPKGDRGDSGFASSSGTTFYTG
PPGPPGPPGQKGSTGAQGPRGPPGEPGNTVSYSGVQTVQGPPGPPGPPGRQGPQGFKGDP
GVPGIPGTSRGSVSVTAGPPGPPGPPGPPGTPGFSSSSDIRQYISEYISRSGQFAVPGPP
GPPGPPGAPGSYTGSLDDLSARIIAYLQRSSSSVRIGIPGPPGPPGPPGQGSLTVSALIA
LLQRDDVRRYVIGPPGPQGPPGPPGATVDGGYGGYTIEQIATYVIKIITDRGLTRGPPGP
PGPAGPPGPGGSGFTTATIDYSALLRNPEFRSWMTSAIQHSNAGPPGPPGVPGLPGPPGP
QGPPGVSTSTVYGSGGRSYSFEDIQRYIQTSGLRGLPGPPGPPGPQGPPGSYSGSVTYSG
NFPRESIRSEVQEYLSSESVRRSIMGPPGPKGQKGDRGDSGVIRTQTQSFSQGDSRYGTH
GTQIKEIDISGLTETLDYSNVAMKVTDYIKNQGLLQEYLVDGPLSRTQVRAIQGPPGPPG
PPGPPGYSRVLASYGNITADLMDFFRAHGTIPGPVGQPGPRGERGYPGPKGDKGDPGQPG
LPGLPGTYTVQIPHRLQKRDTAKKVHGLRHKDLRPADGG
NT seq
6060 nt
NT seq
+upstream
nt +downstream
nt
atggagagattaacaggagggatggacttctccacaggaatgtcagaggagagggttgtg
acagacaccgttacatctaagtccagactcacttctctcccaccaaagggaaccggtgga
tcaaatcacagaattatgtccactggagctggcgggttgggcctggagaagaatgtctta
acccagaacaccagtggaacctatttctcttcatcctctgtgggggtgagcagcagcaca
tatgcctcctcctcaggcgtgtacctgagcggggactcttcgggtgggggagatggagta
gggggcttcctggatgtggagagctatggcagtggtggaggaggaggtgggggaggtggg
gcaggtggaggtggggggagcagttacatggtcagctccacctccgtgtccaaggtgagg
tccagtagctccacagggggaggcagaaggacgcagacggcaagctcatctggaggagtc
tcaccctcaaccttcagggagaggaaggccgtctccagccgctccgggggttatgacgga
agttccagtgcaaattcctctcccgaatttacgcgcaaagattatggaaactattgcgcg
ggcaactcaagaggaagaagcgaaagcagagaaagcgagatccgagccagactgcagagt
gcttctccctcagccaccagatggacagaactggatgacgtgaagaaacttttaaaaggc
cgttcgagcagtgtgagccccactcgctcctcctccgcctccatcactctgcccgtgccc
aaaaagaccactgcggaacccaagaccgtctctgtggcaactcagtcagtgtccagcatg
tttgacactggcctgagatcggaccagttcatcgacaccactggtctttatgataacacc
atctcatttggacagtacagcggcagtgtgaagtcaggccagtacgacacaggtttaaag
accagtgcgtatgacgtgagtgtccgatcaggccagtatgactctggagttaaagcgggc
acctacagtggcagcttggcatctgggcagttcgatacaatgaacgggtacaagtccagc
caatatgatatgagtctaaaatccgggcattatgatctggggctgaagacggaccactac
gactctggggtgaagttgagtcagtatgatattggggtgaagtctggtcattccactatt
cgctcggcccaatatgataatgctacagtggacgctgctctgccagcttttacctggtcc
acggctactctgccctcccagtctgcccccgccgtgagtgccaccagctacagctaccag
atcagcaccaacaacatgggagggtccgtgccactcagtcctgcctctccatcctcactg
tcagtgtatggttttcagaataatttgggtcccacgtctggcagtgtgctcaccaccagt
ggagccaacaccagtgccagcctgggaggttatggagtgcagaaaaacatgtccagtggg
gctgtccttggctctgcagtttccacaggcaccagatctcaaacagaagactcgtataag
aggtttgtggctgcagataaggagaatttttcagccaagagggatggggaaactctgatc
ctggccaaagacagtggaaagcagtttacaagcggcagcagtgtgcacattggaggaggc
tctctgtctggagactccatcaagaaggagaaactcatctcaagctatggagaaacaact
cagctaaaggctgacctcggacaatcgtattatggaagctccggagttttgatgaaagat
aaagccacatatgcggagatccgtcgggacagtggggtttttggaggtgggggattttgc
tgctgttctgattcgtgctgctcgtggtggaaatggctgctcggactcctccttcttggc
cttctcctgcttggacttctctttggtctcatagctctggcggaggatgtgaggaagcta
aaaaaccgcgttgctacactggaggccgaagccgctgtcacctctgcccggaccagccgc
ttctctggtggaaatgaaatcaacaattatgtcgatggagctgggggtgcggggtctagt
actgacaccaagctctatatagggggaggagccataggaacgggagggggcggagcaaca
gcaggggcaggaacagcggcaggggcaggaggggcgacaggggcaggaggggcaacaggg
acagggactagcacagatacacgtgtaggggtgggggtgggagtcggagctggtggtact
gccggaggaaaggcagggggcgtggcgggtggaacttctggcactggtgcaggtggagtg
actgtggttggaggtggagggacgactggtggaggggcaggtagtgctgggggggcagtt
ggaggagggactggtggaggaggcagtaatggagcagggaacaccatcatctactttgga
ggaggaggaggcaccagcggaggaacggggactggcaccgtcactgacacaagatcaaga
tacacggagagcagcagtggaactagctacagtggcactagctacacaggctctaccagc
tatggtggaggcagcgctgggggtgctggcttcacctggagcgggggacaactggatgca
gccactcttcagtcggccattctgaacatgttaagaactgaactgcagtcacaagcattc
agagcatatttagtgtcttctgttcaaggagagcgggggctacctggacctaaagggggc
gtggcgggtggaacttctggcactggtgcaggtggagtgactgtggttggaggtggaggg
acgactggtggaggggcaggtagtgctgggggggcagttggaggagggactggtggagga
ggcagtaatggagcagggaacaccatcatctactttggaggaggaggaggaggcaccagc
ggaggagcggggactggcaccgtcactgacacaagatctagatacacggagagcagcagt
ggaactagctacagtggcactagctacacaggctctaccagctatggtggaggcagcgct
gggggtgctggcttcacctggagcgggggacaactggatgcagccactcttcagtcggcc
attctgaacatgttaagaactgaactgcagtcacaagcattcagagcatatttagtgtct
tctgttcaaggagagcgggggctacctggacctaaaggggatccaggcttgaaaggagaa
acaggttacccaggaattccaggtcccatgggtcatgctggtcccgagggtcccaaaggc
caaaaaggaagtatgggtgaagcaggacccgaggggcccccaggtatcaggggtcgtgag
ggtccaccaggccccagaggagagccaggaccacatggttttggagagaaaggagacaaa
ggtgctgctggtgaacctggtgttgctggaattatgggcccggttggaccaaaaggtata
gtgggatctcctggccatgttggacctccaggccaaccaggtgtgcaaggattccgtggc
gaaccaggattaccagggctcaaaggtgacagaggacttcctggattccaaggtctcaaa
ggtgaaccaggtgacaaaggtccaaggggtctgccaggtgacattggtgtacctggggta
cctggtccagctggagagaaaggacctaaaggatcaatgggtctttctgggcaagatggt
gcaaaaggctcaagaggtgatcaaggccctgttggacctccaggactccgaggcccggct
ggtcctcctggagatgctggtttgccaggtcagcctgggcttcaaggacctccaggagtc
gcaggaattccagggcgtcccggtatcaaaggtgaacccggtgaaccaggaaggattatt
aatgcagccggttctacctcagttggcatcccaggacccccaggtccctctggtcccccg
ggtcctgctggacctccaggattatcaggtcccattggtcctgctggccttcctggccaa
actggtcctaaaggtgataagggcgacaaaggggagccaggagtgagcgtgaccaccagt
gaaaccattagctccagtagaactcaaagccagtattctgcaagtggagcgtctggagta
gttggcccaccagggccccccggacccccaggaccaccagggcgtccaggagattcaaga
caaggtccacctgggcctcctggtccacctggccagcccggctatggtagaccagggcct
aaaggagacagaggagactcaggctttgcttccagctcaggtacaacattctacaccggg
ccacctggaccacctgggcctcccggacagaagggatcaaccggagcccaaggaccaaga
ggccccccaggggaaccaggaaacacagtttcttacagtggagtgcagactgtgcaggga
ccaccagggccaccagggcctcctgggcgccagggaccacagggattcaaaggagatcct
ggagtcccaggtattcccggcacatccagaggctcagtgtctgtcactgctggcccacct
ggtcctcctggacccccaggaccacctggaacgccaggcttctcttcttccagtgacatc
cgccagtacatcagtgaatacataagccgtagtggccagtttgctgtaccaggacctcca
ggcccccctggacctcctggggcccccggatcctacactggctctctcgatgatctgtct
gctcgtatcattgcatacttacaacggtcaagttctagtgtgagaatcggtataccagga
cctccaggaccccctgggcccccgggtcagggttccctgacagtcagtgctctcatagca
ttgttacagagagatgatgtgagaagatatgtgataggaccaccaggcccacaaggacca
cctggacccccaggagcaactgtcgatggcggttatggtggttacactatagagcagata
gccacttatgtcatcaaaatcatcactgacagaggactcactcgaggaccaccaggacca
cctggacctgccggacccccaggccctggaggctcaggattcactacagccaccattgat
tattctgctcttttgagaaatcctgaattccgctcgtggatgacctctgctatacaacac
agtaatgctggacccccaggcccacccggtgtcccaggactgcctggtccccctggacca
cagggacctcctggagtgtccacctccacagtctatggctcaggaggtcgcagctacagc
tttgaggacatccagagatacatacagacttctggcttacgaggtttgccagggcctcca
ggtcccccaggcccacagggaccaccaggcagttacagtggttctgtcacatacagtgga
aacttcccccgagagagtatccgttctgaggtgcaggagtatctgtccagtgagagtgtt
cgccgctccatcatgggacctccagggcctaaaggacagaagggagaccgtggagattca
ggtgttattcgcacccagactcagagtttctctcagggtgattctcgctatggcacccat
gggactcagatcaaagagatcgacatcagtgggctcacagagacactggactactctaat
gtggccatgaaggtcacagactacattaagaatcaaggcctcctgcaggagtatctggta
gatggacctctgagtcgaactcaagttcgagctattcagggccctcctggtcccccaggc
ccccccggccctccgggatacagccgtgtcctggcctcctacggcaacatcactgctgac
ctgatggacttcttcagagcacatggcaccatcccaggccctgtaggacaacccggtccc
agaggggaaaggggctacccaggacccaagggagacaaaggtgatccgggacaaccaggt
ctaccaggattaccaggaacatacactgtacaaattccacacagactccagaagagagac
acagctaaaaaagtgcatggtcttcgtcacaaagatcttcgcccagctgatggaggctga
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