Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110157016
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Entry
110157016 CDS
T05002
Symbol
msh6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110157016 (msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpec03400
]
110157016 (msh6)
DNA repair and recombination proteins [BR:
bpec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110157016 (msh6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
110157016
NCBI-ProteinID:
XP_020776916
LinkDB
All DBs
Position
Unknown
AA seq
1376 aa
AA seq
DB search
MSKQRSLFSFFGKSPPPTVAKPKPAPSPTEADLPSSVEKSNSSPKEQAKQQQQPTPKINK
IKAKSDAKNAKSGFNKLFGDKAVPSKESTPKFSFNAGSLVWAKMEGHPWWPCMVVPQPLT
GQQMRGKGKDQRVHVHFFDEPPTRGWVNTKYIRAYQGSDSSDAKIGGVFFSNKPVIRRSM
ELADAVMFDTDEKRLKMPICTDPSDDEEEEEDMEVDKSTISDEDASFEEQKSEEIKSSKV
SRRSSRAAVKNENKPKRRRIIVASDSDGSEDEFKPEHAASSSDDDEEEPAMSSEEESESP
ESEPESPIKPVKRKRPVEKSTNAKPKAPSTPVSAPKRSPLMVAADTKSRLSAFSAPDSFE
CQANTGGSGGATVWDHEKLEWLQDGRKKDGKRRRQSEEDYDPSSLYVPDDFLNRQTPGMR
RWWQLKADMYDTVIFYKVGKFYELYHMDAVVGVNELGLTFMKGTWAHSGFPEIGFARFSD
VLVQKGYKVARVEQTETPEMMEARCKSMFKPSKFDKVVKREVCRIITKGTQTYSVLDGAP
SESQSKFLLSLKEKAEEESSGRCRIYGVCFVDTSVGFFHVGQFEDDRHCSRLRTLIAHYP
PAEVLFEKGNPSVETRKIFKASLSAALQEGLNASSQFWDAQKTLKTLSEEDYFSENANKE
KSGNSLLPSLLKNMTSASDSLCLTPKDGYELALSALGGCIFYLKKCLVDQELLSMANFEE
YVPVDVELEKSCGAASFFSQTRQRMVLDGVTLANLEIFQNGSGGTEGTLLERLDTCSTPF
GKRLLKQWLCAPLCNAKSIRDRLDAVEDLMGAQAQASEVSELLKKLPDLERLLSKIHSIG
TPLKGQEHPDSRAVLYEEVTYSKRKIADFLSALEGFKTMQEIINVMSAMSGDFRSVLLCQ
VVTLKHEKNGIFPDLSEELKRWDTAFDHQKARTTGVITPKSGFDPEFDQALTGIKNCERE
LQDYLDRQKKRLGCKNMSYWGTGKNRFQMEVPDSVSERNIPEEYEVKSTKKGWKRYVTKE
SEKLFSELQGYEEKRDAALKDCMRRLFYNFDKNYKDWKTAVECMAVLDVLLALSRYSQGG
DGPMARPEVVLPEDDDESAPFIDLLGSRHPCVTKTFFGDDFIPNDIHVGCPGSSDSDEEK
SAASCVLVTGPNMGGKSTLMRQCGLVIILAQLGCYVPAESLRFTPVDRVFTRLGASDRIM
AGESTFFVELSETASILHHATKHSLVLLDELGRGTATYDGTAIASAVVKELAEKICCRTL
FSTHYHSLVEDYANNTAVRLGHMACMVENECEDPSQETITFLYKFITGACPKSYGFNAAR
LANLPEEVIQIGHKKAREFERSTISLRLFKKICQFAKDPTLDRTHFASIVQMINTL
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacagaggtctctcttcagcttttttggcaagtctcctccaccaactgttgca
aaaccgaagcctgctccatctcctaccgaggcggacttgccctcttccgtggagaaatcc
aactcttctccgaaagaacaagcgaaacagcagcagcaaccaactccgaagatcaacaag
atcaaagcgaaaagtgatgccaaaaatgcaaaaagtggatttaacaaactgtttggagac
aaggcagtgccgagtaaagaaagtaccccaaagttctcatttaatgcaggctcacttgtg
tgggccaaaatggaggggcacccctggtggccttgtatggtagtaccacagcctttaacg
gggcagcagatgagaggaaagggcaaggaccagcgtgtacatgtccatttctttgacgag
ccgccaactagaggatgggtcaacacaaaatatatcagagcataccaggggtctgacagc
agtgatgccaaaattggaggggtgttcttcagtaacaaaccagtcattcgtcgttcaatg
gagcttgcggatgctgtcatgttcgacacagatgaaaagagactaaagatgcctatttgc
actgacccctctgatgacgaagaggaggaagaggacatggaggttgacaaatcaaccata
agtgacgaagatgcaagttttgaggagcagaagagtgaagaaattaagtcttctaaagtc
agccgtcgttcttctagagcagcggtgaaaaatgaaaacaagcccaagcgaagacgcatc
attgtggcttcagacagtgatggctctgaagatgagtttaaaccagagcatgcagccagc
agcagtgatgatgatgaggaagagcctgccatgtccagcgaagaggaatcggaaagcccg
gagtccgaacctgaaagtccgataaaaccagtaaagcgcaaacgccccgttgagaaatcc
actaatgctaaaccgaaagcacccagtacccctgtctctgctcctaaacggtctccattg
atggttgcagctgacactaagtcccgcctctctgctttctctgctccagacagctttgag
tgccaggcaaatacaggaggaagtggcggcgccaccgtttgggaccatgagaaattggaa
tggctacaggatgggcgcaagaaagacggcaaaagacgtcgacaaagtgaggaagattat
gacccatcgtctctatatgtcccagatgactttttaaaccgtcagacccctgggatgcga
aggtggtggcagctcaaagcagacatgtacgatacagttattttctacaaagtgggcaag
ttttatgagctttaccacatggatgctgttgtaggggtcaatgaacttggacttacattc
atgaaaggcacctgggcgcattcaggctttccagaaataggttttgcgagattttcagat
gtactcgttcaaaaaggctacaaggtggctagagtggagcagacagagactccagaaatg
atggaagcacgctgcaagagcatgtttaaaccctctaaatttgacaaagtggtgaaaaga
gaagtttgtaggattatcacaaaggggacgcaaacctatagtgttctggatggtgctccg
tcagaaagccagagcaagtttctactgagtttgaaggaaaaggctgaggaggagagctcg
ggccgctgccgtatatatggagtgtgttttgtggacacctctgtgggttttttccacgtg
ggacagtttgaagatgaccgccactgctctcgcctccgcaccctgatcgctcattatccc
cctgcagaagtgctctttgaaaaggggaacccctcggtggaaacacgcaaaatctttaaa
gcctctttgtcagctgctctccaggagggacttaacgccagcagtcagttttgggatgct
cagaaaactcttaaaaccctttcagaagaagattatttcagtgaaaatgccaacaaagaa
aagagtggtaacagccttcttccatctctcctcaaaaacatgacttcagcaagtgactcc
ttatgccttacacctaaagatggctatgaactggcactttctgctctgggtggatgcatt
ttctacttaaagaagtgtctcgtggaccaagaactgctgtctatggccaactttgaagag
tatgtccctgtcgatgtggagttggagaagtcatgtggagcagctagcttcttctcccaa
acacggcagcgtatggttttggatggagtaacgctggcaaatttggagatatttcaaaat
ggttcaggtgggacagagggcacattgctggagcgtttggatacctgttcaaccccattt
ggcaaaaggcttttaaaacagtggttatgtgcgcccctgtgtaatgccaagtctatccgg
gacagattggacgcagtggaagatcttatgggagctcaagcccaggcgtcagaagtgtca
gagctgctcaaaaaattgccagatttagagcgacttctcagtaaaattcacagcatcggc
acgcctctgaagggacaggagcatcccgactccagggctgttctctatgaagaagtcacc
tacagcaaacgcaagatcgcagacttcctctcagcgctggaagggtttaaaaccatgcaa
gagatcataaatgtgatgtcagccatgtcaggggattttcgatctgtgttgctttgtcaa
gttgttactttaaagcatgaaaagaatggcatctttcctgatctctcagaggaactcaag
cgctgggacacggcatttgaccaccaaaaagcacgtaccactggagtcataacccccaaa
tctggctttgacccagagtttgaccaagctttaactggcatcaaaaactgcgaaagagaa
ctgcaagactatttagacaggcagaagaagaggctcggatgtaaaaatatgtcctattgg
ggaacgggcaaaaaccgctttcaaatggaggttccagacagtgtttcagagaggaacatt
cctgaagagtatgaggtgaaatcaacaaagaaaggctggaaacgctacgtgaccaaggag
tcggagaaactgttttctgagctgcagggatatgaggaaaaacgggatgcagcgctcaaa
gactgtatgaggcgcctcttctacaactttgacaaaaactacaaggactggaagaccgct
gtggagtgcatggctgtgcttgatgtgcttttagccctgtcccgctacagtcagggtgga
gacggaccaatggccaggcctgaggtggttcttcctgaagatgatgacgagtctgctccc
ttcattgatctgctgggttctcgtcacccatgtgtcacaaagaccttttttggagatgac
ttcattcccaatgacatccacgtgggctgtcccgggagcagtgactccgatgaagagaag
agcgccgcctcctgtgtcctagtcactgggcccaacatggggggcaagtcaactctcatg
agacagtgtggacttgtgatcatcctggctcagctgggctgctacgttcccgccgagagc
cttcgcttcactccagttgacagagtcttcactcgtctcggagcttcagatcggattatg
gctggtgaaagcactttctttgtggagctcagtgagacagccagtatcctgcaccatgct
actaaacactcgcttgtgcttctggatgaacttggaagaggcacagcgacatacgacggg
acagccattgccagtgctgtggtgaaggagctggcagagaagatctgttgtcggaccctg
ttctctactcattatcactctttggtggaggactatgccaacaacactgcagtccgcctg
ggacacatggcatgtatggtggagaatgaatgtgaagatccaagtcaagagactataaca
ttcctgtacaagttcatcactggggcctgtccaaagagctatggttttaatgctgctcgc
ctcgccaacctgcctgaagaggtgatccaaatcgggcacaagaaagcccgagagtttgag
aggagcaccatcagcctcagactcttcaagaaaatctgccagtttgccaaggatcccaca
ctggacaggacacacttcgcatctattgttcaaatgattaacacactttaa
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