Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110157281
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Entry
110157281 CDS
T05002
Symbol
zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bpec04121
]
110157281 (zswim8)
Ubiquitin system [BR:
bpec04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
110157281 (zswim8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Ribosomal_L24e
Motif
Other DBs
NCBI-GeneID:
110157281
NCBI-ProteinID:
XP_020777231
LinkDB
All DBs
Position
Unknown
AA seq
1921 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRIRAVKDPLQIGFHLSATVVSSQTGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTEQCLTYEQIISWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTMSPCRRMEMASQLKLWHLKVIEIVKRGQHRKSLDKLFQGFKPALESCYFNWEVAY
PLEGITYCSTDKKSATFCWSRALHNHRGVKATAVPAVGDSQEVCGGKCEGGALRGSQQEV
AVRPKESVLSKRKGLSVSGGGGMLVRLGGSMSLSLDDAGGKCLYKGGNSSGGKLKISQGG
ASGKGALSGGSGGLGGGKHSSNKRRTSSEDSSLEPDMAELSLDDGCSLALGAEASNTFEF
LPPPPEMLPSPSPLLREPRKSSTGSNKMFDSKRHSPAAPPASDLPCLTTGETILIVRSNG
TENNNESGPINVRKEEVDPGDIALSASSAEKPGPVPIASKLPVDQREAGASGGRGAEGGE
DPAVGDDDYQAYYLSAASEEGADRQLVESHQDDEPDIFAGIKPLEQEGRMEVVFACAEAL
HAHGYSNEACRLAVELARDLLANPPDLKVEQPQTKGKKSKVSTSRQTQTATNTLSKTAFL
LTVLSERLELHNLAFCTGMFSLELQRPPASTKALEVKLAYQESEIVALLKKIPLGLVEMS
TIRERAEQLRDGNFCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNRNNEMPGDEEL
GFEAAVAALGMKTTVSEAEHPLLCEGTRRVKGDLALALMITYKDDQSKLKKILDKLLDRE
SQTHKPQTLSSFYSSKPAASSQRSPSKHATTSHGGVGGASGGLSKHTPSSATPLPASTTN
QSTAVSLAPDEINNQQELSQMQNTLSGESASEAKEHEGPSTSSEQQNETVLFKLETTVPS
RLALGARYGYNQRCWGSPVRQKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAAASW
GRGQDSDSISSSSSDSLGSSSSSGSRRAGGGARAKNTDTSRYKGRRPECHAPHVPNQPSE
AAAHFYFELAKTVLIKAGGNSSTSIFTQPSASGGHQGPHRNLHLCAFEIGLYALGLHNFV
SPNWLSRTYSSHVSWITGQAMEIGSAALNILVECWDGHLTPPEVASLADRASRARDPNMV
RAAAELALSCLPHAHALNPNEIQRALVQCKEQDNVMLEKACMAVEEAAKGGGVYPEVLFE
VAHQWYWLYEQSVGGSSGQQREASSRCGANGGSGRRPPEANCVLDNGSNLDAPGVATVTA
SVTATAVVPVISVGSTIYQSHAMPGQAIAHPHGQGLHPYTTLQAHLPTVCTPQYMGHPLQ
HVPRPAVFPVSGAAYPQGMHPAFIGAQYPFSVATGPPPPIAATAVTFPGVPVPSMTQIAV
HPYHTETGLPLSTTVAVGSVHTGTTIQTMQGASMPSLSSQPGPLVSPPFPTEEEQHSQPL
SQQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAARLGVNYVY
QFCVGAAKGVLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQYIHHRL
IHLTPADYDDFVNIIRSARGAFCLTPVGVMQFNDVLQNLKRGKQTKELWQRISLEMTTFS
P
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatgttcgccgagtgggaggatggggaaaggttctccttcgaagactcagac
cggttcgaggaagattcgttgtgttcgtttatttccgaagcggagagcctgtgtcagaac
tggagaggctggaggaaacagtctgcgggacccaactcccccactgtcaagataaaagat
ggtctggtgatcccactggtagagctgtcagccaaacaggttgctttccacattcctttt
gaagtagtggaaaaggtctaccctccagtgcctgaacaactccagctacgcatcgcttat
tggagcttccctgaaaatgaagaggacatcagattgtactcatgcctggctaatgggagt
ccagatgaattccagcgtggagagcagctttaccgaatcagagctgttaaagaccctctg
cagataggtttccatttgagtgcaacagtagtgtccagccagactggacagtcgaaggga
gcgtataacgtggcggtcatgtttgaccgctgccgcatcacttcctgcagctgtacctgt
ggggctggggccaagtggtgtgcccatgtggtagcactgtgtctcttcaggatacacaat
gcctctgccgtgtgcctgagagccccagtttcagagtctttgtccaggctgcagagagac
cagctccagaaatttgctcagtacctcatcagtgagctgccacagcagatcctgcctaca
gcacaacggctacttgacgaactgctgtcctctcagtcaacagccatcaatactgtgtgt
ggagctcctgatcctactgctggaccctctgcttcagaccaaagtacctggtatctggat
gaatccactcttagtgacaatattaaaaagactctccacaagttctgtgggccttcccct
gtcgtctttagtgatgtgaactccatgtacctgtcgtccacggagccccctgctgctgca
gagtgggcgtgtctactccgccccctccggggtcgtgaacctgaaggcatctggaacctt
ttgtctattgtcagggagatgttcaagagacgagacagcaacgctgcacctctgctggag
atcctcacagagcagtgcctcacctatgaacagatcatcagctggtggtacagcgtgcgc
acctcagcgtcccacagcagtgcgagtggccacactgggcgcagcaatgggcagtcagag
gtggcagctcatgcctgtgccagcatgtgtgacgagatggtcgtgctttggaggctcgca
gtactagacccgaccatgagtccatgcaggcgcatggaaatggccagtcaactgaaactg
tggcatttaaaagtaattgaaattgtgaagcgtggtcagcatcggaagtccttggacaag
ttgttccagggtttcaaacctgctctggaatcctgttatttcaactgggaggtggcttac
ccattggagggaattacctattgcagtactgacaagaagagcgccaccttctgctggtcc
agagcacttcataaccacagaggagttaaagcgacagcagtcccagctgttggggattct
caagaagtctgtggaggcaagtgtgagggcggagctctgcgtggatctcagcaggaggta
gcagtgcggccaaaggaaagtgttttgagcaagaggaaagggctgtctgtgagcggaggt
ggggggatgctggtgcggttaggtggcagcatgtcactttctttagatgatgcaggagga
aagtgcttgtacaaaggtggaaactcatctggagggaagctcaagatttcccagggtgga
gctagtggaaagggggctttatcaggaggtagtggtgggttaggaggaggaaagcactca
agcaacaagcgcagaactagcagtgaggacagctctctggagcctgacatggccgagctc
agtctagatgatggctgcagcttggctttaggagcggaggccagtaacacttttgagttc
ctgcctccaccgcctgagatgctgccctcccctagccccttgctccgagagccccgcaag
agcagcaccggctcaaacaagatgtttgactcgaaacgccatagccctgctgcaccacct
gcttctgaccttccctgtttgactactggtgagaccattctgatagtaaggtctaatggt
acagagaacaacaatgagtctggaccaatcaatgttaggaaggaggaagtagatccaggt
gatattgccctctcggcttcctctgctgagaaaccaggtcctgttcccattgcctctaag
cttcctgtggatcagagggaggcaggggcaagtggaggccgtggggcagagggcggagag
gaccctgctgtgggagatgatgactatcaagcctactacttgagtgcagcctctgaagag
ggagcagacagacagctggtggaaagccatcaggatgatgaaccagacatctttgcaggc
ataaagcctctggagcaggagggccgcatggaggtggtatttgcctgtgctgaagctctt
catgcccatggatacagtaatgaggcttgcaggctggctgtggagttagccagagacttg
ctcgccaaccccccggacctaaaagttgagcagccacagaccaagggtaaaaagagcaag
gtttcaacgagtcgacaaacacagactgccaccaacactttgtcaaaaactgcttttctc
ctcactgtgctcagtgaaaggctggagctccacaacctggctttctgcactggcatgttc
tctctagagctgcagagacctccagcatcaaccaaagctttggaggtcaagctggcctac
caagagtcagagattgtggctctgttaaaaaagattcctttgggcctagtggagatgtca
acaatcagagagcgcgctgaacagctcagagatggaaacttttgtgattaccgacctgtg
ttgcctctcatgttggccagcttcatttttgatgtcttgtgtacacccgttgtgtcacca
acaggctcccgtccaccaagtcgcaaccggaacaatgagatgcctggtgatgaggagctg
ggttttgaagctgctgttgctgcacttggtatgaagacaacagtgagtgaggcagagcat
cctcttctatgtgaaggaactcggagagtgaaaggagacttggcattagcccttatgata
acatacaaagatgaccaaagcaagctcaagaagatactggacaagctgttggacagagaa
agtcaaactcacaaaccccaaaccctgagctcgttctactcaagtaaacctgcagcaagc
agtcagaggagcccatccaaacatgccactacaagtcacggaggagtagggggagcttct
ggaggactctctaaacacacaccgtcctctgctacccctctcccggcctctaccactaac
cagtctactgcagtgagcttggcccctgatgagatcaataatcagcaagagctcagccaa
atgcagaatactttatctggagagagcgcctcagaggccaaagagcacgagggaccttct
acatccagcgagcagcagaatgagacggtgcttttcaagttggagaccaccgtcccaagc
cgcttagccctgggagctcgctatggttacaaccaacggtgctgggggtcacctgttcga
caaaagaagaaacatactggaatggcaagtattgacagcagcgctccagaaaccacctcg
gacagttcgcccaccctgagccgcaggcctttgcgtgggggctgggctgcagcgtcatgg
ggcagggggcaggatagtgacagcatcagcagctcctcttctgattctttgggttcatca
tcctctagcggctcacggagagcagggggtggggccagggcaaaaaacactgacacaagc
aggtacaaaggacggcgcccagaatgccatgctccgcatgttcctaaccagccttcggag
gctgctgcgcatttctactttgagctggccaagacagtgttgataaaagctggagggaat
tcatctacatctatattcacacagccttcagccagcggggggcaccagggtcctcacagg
aacctgcacctttgtgcctttgagattggcttatatgctctcggcctccacaactttgtg
tctcctaactggctgtccaggacttactcctcacatgtgtcctggattactggccaggcc
atggagatcggcagtgctgctctcaatatcctggtggagtgttgggatggtcacctgacc
ccaccagaagtggcgtctttggcagaccgagcctccagggccagagaccccaatatggtc
cgagcagcagcagaactggctctgagctgtctgcctcatgctcatgccctcaatcctaat
gaaattcagagagcactagtgcagtgcaaagaacaggacaatgttatgctggagaaagcc
tgtatggcagtggaggaagcagcaaagggtggtggggtgtatccggaggttctctttgag
gtggcccatcagtggtactggctgtatgagcagtcagtcggtggaagttctgggcaacaa
cgtgaagcatccagccgctgtggagctaatgggggctcaggcaggcgccccccagaggcc
aactgtgttcttgacaatggttctaatttggatgccccaggcgtggccactgtcacagca
tctgtcactgccacagctgttgtacctgtcatctctgtgggctccaccatctaccagtcc
catgctatgcctggccaagccatagcccatcctcatggccaaggcctgcatccttacacc
accctgcaggcgcatcttcccacagtctgtacccctcagtacatggggcaccctctgcag
catgtcccacgaccagctgttttccctgtctctggagcagcttatccacaggggatgcac
cctgcctttattggtgctcagtaccctttctctgttgcaactggccctcctcctccaatt
gcagccactgcagtaacctttcctggtgtgcctgttccatctatgacgcagattgcagtg
catccatatcacacagagacaggcttgcccctcagcaccactgtagcagtgggcagtgtc
cacacgggcaccaccattcagaccatgcagggggcatctatgccctccctctcgtcacag
ccagggccattagttagtcctccattccccacagaggaagagcaacacagccagccgctc
agccagcaaggcctgcactatctccactcagcctacagagttgggatgctagcactggag
atgcttgggagaagagcccataatgatcatccaaacaacttctcccgcagccctccgtac
accgaggatgtcaaatggctattgggattggctgcacgattaggggtcaattatgtgtac
caattctgtgttggggcagcaaaaggagtccttagtccttttgttctgcaggaaattatc
atggaggccctgcagaggcttaacccagctcacatccatgctcaccttcgaactccagct
ttccaccagcttgtacagcggtgccaacaagcatacctgcagtacatccaccatcggctc
atccatttgacaccagcagactacgatgactttgtcaacattatccgtagcgctcgggga
gccttctgcctcacaccagtgggagtcatgcagttcaacgatgtgctgcagaatctgaag
aggggcaaacagaccaaggagctgtggcagcgcatttctctggagatgacgaccttttcc
ccctga
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integrated database retrieval system
