KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110157409
Entry
110157409         CDS       T05002                                 
Name
(RefSeq) roquin-1-like
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bpec03000]
    110157409
   04121 Ubiquitin system [BR:bpec04121]
    110157409
Transcription factors [BR:bpec03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    110157409
Ubiquitin system [BR:bpec04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110157409
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4 zf-CCCH zf-C3HC4_2 Prok-RING_4 zf-CCCH_4 zf-CCCH_UNK zf_CCCH_4 FYVE NS3_helicase_C Baculo_IE-1 RING_XB3-XBAT31 zf-RING_6
Other DBs
NCBI-GeneID: 110157409
NCBI-ProteinID: XP_020777408
LinkDB
Position
Unknown
AA seq 1108 aa
MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAISTD
IEQLPVNTALLQLVGGQVPKAQPVALITSPEDSQHYEEARQCVEELALYLKPLSNTRGVG
LSSTAQSILSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLEKGLVAVKTVVHGLVDFIQNHSKKGADPQQPPQHSKYKTYMCR
DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLAARLPGSGGLMPEDGLPLDVAVTRKPS
PLTNGSGAPSLPQLIARGTDSVSYELLRKPVKMDGGSPSAPGSPPDGLDTIPKPGMPLPP
HSMAHPRLPTDHHPGVKPMPVVARGSPVYPQPQLTDMYCIRPPPSASQYEPSQYPPGYHY
QQPPQYVTRDYVRNAQPPSEAGGPPYQDPYPGYGPPERPYQASHSVPPFSYPHPQHYERG
RHGNYNGPPPPPQPYPPQRESLVRMSPAPLDVPPQSGQANSLYHQEPNPRDRYPPDGYYP
PGTQPPPMRPYVRGPSYTGSQHSLDYLHRRRQELLSQLEERKVISPPPFAPSPTLSHPFP
SDYPHEYGDESSKTIVKCREPDYASQYSPWSCDTIGSYIGTKDAKPKDVMVPGSMDMMNV
EAKSLREPSLETPRRGTEVKDDDPIIPFGPQPTVSRFGAISRTSKTGYQTAGPIQAIAAS
SQKSEYSSYGSHGWSGASYPPHQPSSSSQGHFEREQLKFELQQVNQQITQQTQMHNIEAA
SNSLMLQREASALAGQASQSQTVQQQPKWPPGGTNATTVSSEQLSLELHQVEREIGKRTR
EMAMENQVAHEQFKMKPTENGQPEPKAQLEEMSLALSEVSNGSSSLQESAVGGSMLSLTN
KTSALSLCSDPGAAGSEIQKNGVVHSCS
NT seq 3327 nt   +upstreamnt  +downstreamnt
atgccagtgcaagcacctcaatggacagagttcctgttgtgcccaatctgcacacagaca
tttgaggagactgttcgacggcctataagcttgggctgtggacacactgtctgcaagatg
tgcctgaacaagttgcaccgaaaggcctgtccctttgaccagacggccatcagcacggac
atcgagcagttacctgttaacacagccttgttgcagctggtcggaggccaggttcctaaa
gctcagcctgttgcgttgatcacaagtccagaagattcacaacattatgaggaagctaga
cagtgtgtggaggagcttgctctatacctcaaacctctcagcaatactagaggtgtaggt
ctgagcagcactgcacaaagcattctcagtcgacccatgcaaagaaaactggtaacgctg
gtccactgtcagctggttgaggaggagggccgtgtgagggctatgagagctgcccgcagt
ttgggtgagagaacagtcacagaactgattttacagcaccaaaatcctcagcagctctcc
tccaacctgtgggctgctgtccgtgcacgaggatgccagtttcttggtccagcgatgcag
gaagaggctctaaaactggttcttctagctttagaagatggctctgcactatccagaaaa
gtattagttctttttgtagtccagaggttagaaccccgctttccacaggcatcaaaaact
agcataggccatgtggtgcagctcctctacagggcatcctgcttcaaggtgacaaagcgt
gatgaagattcgtctctaatgcaactaaaggaggagtttcgtacgtatgaggctttgagg
agggaacatgactctcagattgttcagattgctatggagggtggcctacgcattgcacca
gaccagtggtcttctttgttgtatggagatcagtctcataagtcacacatgcagtctatt
atagataagctgcaaactcctgcatcatttgctcagagtgttcaagagctgacaatagca
ctgcagaggactggtgacccagctaatttaaacaggcttcgaccccacttggaactactg
gctaatattgatcccagccctgatgctccacctcccacctgggaacaactagagaaggga
ttggttgcagtaaagacagttgttcatggtctggtggatttcattcagaatcacagcaag
aaaggagcagaccctcaacagcctcctcaacacagtaagtataaaacatacatgtgccgc
gacatgaaacaaaagggaggatgtcctcgtggtgcaagttgcacctttgctcattctcag
gaggaactagagaaatatcggaaaatgaataaacgactggcagctcgccttcctggaagt
ggtgggctcatgccagaagacggccttcccctggatgtagccgtgactcggaagccttcg
cccctcaccaacggcagtggggcaccttcccttccccagctcattgcccgtggcactgat
tcagtttcttatgaactgctccgcaaacctgtaaaaatggatggaggcagtcccagtgca
cccggatcaccacctgatggtctggacactattcccaaacctggcatgccactaccacct
catagcatggctcatccccggctgcccacagaccatcaccctggggtcaaaccgatgcct
gtagttgccagaggttctccagtttacccacagccccagttaaccgatatgtactgtatt
aggccaccaccatctgcctctcagtatgagccctcccaatatcctccaggataccattat
caacagccaccacagtacgtcacccgagactatgtacgtaatgcgcaaccccccagtgag
gcaggtggcccaccataccaggacccctatcctggctacgggccacctgagaggccgtac
caagcatcccactctgttcctcccttctcctatcctcatccacagcactatgagagaggt
cgtcatggcaactacaatggccccccacctccaccacagccgtatccaccacagagggaa
agtctagtcagaatgagccccgctccacttgatgttcccccgcagtcaggacaggccaac
tcactatatcatcaagagccaaatcctcgcgatagatacccacctgatggctactatcca
ccaggcactcagcccccacccatgaggccatatgttagaggcccatcttacacaggctca
cagcatagtctggactacttgcatcgtcgccgacaggagctgttgtcccagctagaggaa
cgaaaggtcatttccccaccaccatttgctccatcccctactctttctcatccatttccc
agtgattacccacatgagtatggtgatgagagctcaaaaacaattgtgaaatgtagggag
ccagattatgccagtcaatattctccttggtcatgtgatacaattggttcctacattggt
acaaaagatgccaaacccaaagacgttatggttccagggagcatggatatgatgaatgta
gaagcaaaaagtctgagagagccatcactggagactcctcgacggggaacagaagtcaaa
gatgatgatcccattatcccttttggtcctcagcccactgtgtcccgttttggtgccatt
tcccgcacctcaaagactggctaccaaactgctggccctatacaggctattgccgctagc
tctcagaagtcagagtattcatcatatggaagccatggatggagtggagcatcatacccc
ccccatcagccatcttcttcctctcagggacactttgagcgagaacagttaaagtttgaa
ctgcagcaggtcaaccaacagattacccagcagacacagatgcacaacatcgaagctgcg
agtaactccttaatgctgcaaagggaagccagtgcccttgcaggccaggccagccagagc
caaacagtgcagcaacagccaaagtggcctccagggggcacaaatgccacaacagtttcc
agcgaacagctcagcctggagctccatcaggtggaacgagagattggcaagagaacaaga
gagatggccatggaaaaccaagtagcccatgagcagtttaaaatgaagcctacagagaat
ggacaaccagagccaaaggctcagttagaggaaatgtcactggccttaagtgaggtgtct
aacggctccagcagtctgcaagaaagtgcagtgggcgggtccatgctgtcactgaccaat
aagacgtctgcattgagcctgtgctcagatccaggtgctgctggttcagagattcagaaa
aatggtgtggtccattcatgctcttag

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