Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110157426
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Entry
110157426 CDS
T05002
Symbol
nup188
Name
(RefSeq) nucleoporin NUP188 homolog
KO
K14311
nuclear pore complex protein Nup188
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110157426 (nup188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110157426 (nup188)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110157426 (nup188)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Motif
Other DBs
NCBI-GeneID:
110157426
NCBI-ProteinID:
XP_020777422
LinkDB
All DBs
Position
Unknown
AA seq
1741 aa
AA seq
DB search
MADSGPIVRSCRELWTILLGRSALREPAQIEEELDKHWERIHQGLSYYKPPSSASAQKLK
ENKDVAQALKDFGLRISKLLGLDEQQSVQLLQCYLQEDYRGTRDSLKVVLKDERQSQALL
LKITDYYYEERVCLLRCILLLLTYFQDERHPYRVEYSNCVTKLEKDLVNNCQTQFKDLFN
AEAPTWETHGPLMTERQVSRWFFQCLREQSLLLELLFLYYAYFEMTPSDLLSFTRMFKEQ
GFGLRQTNRHLVDKSMDALVERIGYLGSLILVEGMDIDFLHKCALEDRTEQHQFSSAADV
VKVMDQLLVTFGDIHHHGPVLLAWVLLRHTLRPEETNPVVRRIGNTALQLGVFEYLSTML
KSLGASGNNCTASTAKMCIYGLLSFVVTSFEEDSLQTERGTTGSPLIDVACDVLSAPSLA
EIFWEMKPNMGMGMILDSAVGMFPHKIAPLLQLLTALLSNKTTVKKVYNFLDKMSLYTEI
HKHKPNDIIAQDDETLWRRRTPKLLYPLGSGQTNLWLPQGVRGQVLMRPEQDYVVRWDYS
YSAWALFTCEVEMLLHVVSTADVLSHCTRVKPILDLVHKIISTDWSVSDCLLPLTSRIYM
LLQRLTSVISPPVDVIASCVNCLSVLAARLPGKVWSSLQHTGFLPFASNALTSMAQCVSA
EGMKAGNYGNLLVQIEQPRGEYPVTIAFLRLITTLVKGQLGSTQNSGLIPCVLLVLKEML
PTYHKWRYNTYGVRERIGCLILELIHGILNLSPEGESQGSTPTLQSLCIYSLANTEAGQA
IVNIMGVGVDTIDVVLAAQPSSGGSEGPGQILIQTVKLAFSVTNNVIRLKPPTDVASPLE
QALTQHGGHGHNLVVVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIR
DAFLIRLQSKTEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDSSEGSKEFLLGEWSC
LHVVLDLIDSKQQGKYWCPPLLHRAALAFLLALWQDRRDSAISVLRTKERFWENLSTPLF
GSLPPPSDTAEPCVLETCAFVMKILGLEIYYVVSSSLEKTLKDSLQRFSNSRRYEYWSHY
VKSLVCHVAEMEEEGVCYFAETQMLIAAWRMLLILSTTHSEVMHLTEDSTKLKLFMDVLD
GAKAALTTPTSVPCLRLGSMMATLLLILLKQWKSVVAAAPDVLCPLSLILESVLQADQQM
MERTKAKIFSALISVLQIQGLNGGEIALLPQLLLSVCETVKDESLALIDNTRLLRQAGES
LDDEDSMETDSPRSQQKDRRDGVCVLALHLAKELCRSNEDGEQWVSVMRKVPVLPSVLSA
LELSLRSKHNLYFTEAALHLLLTLARTPQGAAAVAGAGITQTICLPLLSVYEVSTVSQVS
FSRRSQDSACWPGVYRLCMSLMESLLKTLRYTFINEALDFVGVHQERILQCLNAVRTVQS
LACLDEADHTVGFLLQLSNFCKEWQFHLPKLLSDIQTNLCYLCQTCTYLLHSKKMLHHYL
QAKNGEALPPGPLPRTSRLPPTLSKDAPSGGEREEVEQKALLAVQCSLLKILSKTLATLQ
HFTPDCCQILLDQCMDLAEYRILFVLSFTTPAFDPDVPPSFGTLLATINVALSILSEMDK
KKEPASLSIVSLVSSEEIQALKSLLIFTMENCFYVLISQAVRCLKDSSIPPRDKQRLKQE
LSSELSTLLSSLSRHFRRGSPSSPASGFPLSQTKAATPKSSHEGQEPFIQLVQAFVRLVQ
R
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcagggccgatcgtcaggagctgcagagaactatggactatactgttggga
agatccgcattacgcgagccggctcaaatagaagaggagcttgataaacactgggaaaga
atacaccaaggtctgagttattacaagccacccagctctgcatcggctcagaagctgaaa
gaaaacaaagatgttgctcaagcattgaaggattttggtctcaggatcagcaagctatta
ggtcttgatgaacaacaaagtgtccaacttttgcagtgttacttgcaagaggactataga
ggaacacgagactcactaaaggtcgtactgaaagacgaaaggcaaagtcaggctcttctt
ctaaagataactgactattactatgaggagcgtgtgtgtctgcttagatgcatcctcctc
ttactgacatactttcaggatgagcgacatccctatagggttgagtactccaactgtgta
actaaacttgaaaaagatctagttaacaactgtcaaacacagtttaaagatctttttaat
gctgaagctccaacgtgggaaacccatggacctcttatgactgaacggcaagtttcacgt
tggttcttccagtgcttgagagagcagtctttgcttcttgagctactctttctatactat
gcctattttgagatgaccccatcagatctcttgagcttcacaagaatgtttaaggaacaa
ggctttggtttgcgccagaccaaccgacatctggtggacaaaagtatggatgccctggtg
gaacgtattggctaccttggctctcttatcttggttgagggaatggacatagactttctt
cacaagtgtgctctggaggatcgtactgaacaacatcagttttcaagtgctgctgatgtg
gttaaggtgatggatcagctactagttacatttggagacattcaccatcatggccctgtc
ctgctagcatgggtcttattgagacacactctgaggcctgaggagaccaatcccgttgtc
agaagaattggtaacactgctctgcagctgggagtttttgaatacctctctactatgctt
aaaagtcttggagcttctggaaacaattgcacagcaagcacagcaaaaatgtgcatttat
ggcctcttgtcttttgttgtcacgtcatttgaagaggatagcctacagacagagagaggt
acaactggatctcctctgattgatgttgcctgtgatgtcctctctgctcccagtctggca
gagatcttctgggaaatgaagcctaacatgggaatggggatgattttggacagtgcggtt
gggatgtttcctcacaaaattgcacctttgttgcaactattaactgctcttctttcaaac
aagactaccgtcaaaaaggtttacaactttttagataagatgtcattgtacacagaaatt
cacaaacataaacccaatgacataatcgcccaggatgatgaaacactgtggagaaggagg
acaccaaaactgctttatcctcttggctctgggcagacaaacctgtggctacctcagggt
gtgcgaggccaggtcctgatgaggcctgagcaggactatgtggtgcgctgggactattcc
tacagtgcctgggctctgttcacatgtgaggtggagatgctgctccatgttgtttccact
gcagatgttctttcgcattgtactcgtgtgaagccgatcctagacctagtccataaaatc
ataagcacagattggtctgtgtcagactgtcttctcccgctcacttcccgcatctacatg
cttttacagagattgacatcagtcattagtcccccagtagatgtaattgcatcatgtgtc
aactgcctgtctgttttggctgcaaggttgcctggaaaggtgtggtcaagtttacagcac
acaggttttttaccatttgcatcaaatgcactgacctccatggctcagtgtgtaagtgct
gaggggatgaaagcaggcaactacggcaacctgttggttcagattgagcagccaagaggg
gagtatcctgtgactatcgcctttctacgacttattacaactctagttaagggtcagctt
ggaagcacacagaacagtggtctaataccttgtgtgctgttggtgctaaaggaaatgctc
cccacttatcacaagtggcgatataacacctatggagtacgtgagagaattggctgtcta
atattggaacttatccatggcattctcaatctgagccctgaaggagagagccagggcagc
actcctactttgcagtccctatgcatctacagtttggcaaacactgaggctggtcaagcc
attgtcaatataatgggagttggtgtggatactatagatgtggtactggctgcacagcct
agcagtggtgggtctgagggtccaggccagatccttattcaaactgtgaaactggctttc
tctgtgacaaacaatgtaatacgcctgaaacctccgactgatgtggcctcgcctcttgag
caagctctgacacaacatggtgggcacggccacaaccttgtagttgtacttgcaaagtac
atttaccataaacatgacccagcactacctcgacttgccatccagctcctcaagcgcctt
gctactgtggctcccatgtcagtttacgcttgtcttggtagcgacgctgcagctatccgg
gatgctttcctcatacgactgcagagcaaaacagaagacatgaggatcaaagtcatgatt
ctggagtttcttactgttgctgtggaaactcaaccaggcctgatcgaactctttcttaac
ttagaagtcaaagatagtagtgagggttcaaaggagtttctcctgggagaatggagctgt
ctccatgtggttttggacctaattgactcaaaacagcaaggaaaatactggtgtccacct
ctactccacagagcagctttggcctttcttctcgctctctggcaagatcgcagggatagt
gccatttctgtactcagaaccaaggaaaggttttgggaaaatttgtccacgcccttattt
gggagtcttcctcctccttcagacacagcagagccctgtgtgcttgagacttgtgcgttt
gtcatgaaaatacttggacttgaaatctattacgttgtgagtagctctttggaaaaaact
cttaaggatagtctccagaggttttccaacagtcggcgctacgagtattggtctcattat
gtcaaatctctggtgtgccatgtcgcagagatggaggaggagggtgtgtgttattttgcg
gaaacacaaatgttgattgcagcctggagaatgctgcttattctctccaccactcattct
gaagtgatgcatttaactgaggattcaaccaagcttaaactatttatggatgttttggat
ggagctaaagctgcacttacaacacccacatctgtaccttgtctacgtctcggatccatg
atggccactctactactcattctcctcaaacagtggaaaagtgtggtagctgctgcgccc
gatgtcctctgccctctctcactcattctggaaagtgtcctgcaagctgaccagcagatg
atggagaggaccaaagccaaaatcttttctgctctgatatctgtgctacaaattcaaggc
ctcaacggaggagagattgctctgctgcctcaacttttactgtccgtctgtgaaaccgta
aaagatgaatccttggctctcattgacaatactcgtttactgcgccaagcgggagagagc
ttggatgatgaagatagtatggaaaccgactctcctcgtagccaacagaaggatcggaga
gacggggtttgtgtacttgctctgcatttagcaaaggaactgtgtcgcagtaatgaagat
ggggaacagtgggtttcggtgatgaggaaagtgccagtgctgccttctgttctcagtgcc
ctggagctcagcctgagatccaagcacaacctctactttactgaggctgcccttcatctg
ctgctaacattggctcggactccacagggggctgcagcagttgctggtgctggcataact
caaaccatctgtctgcctctcctcagtgtatatgaagtgtctactgtatcccaggtaagt
ttctcacgcaggtcccaagactctgcatgctggcccggtgtctatcgtctgtgcatgtcc
ctgatggaaagtctgctcaaaactctccgttacactttcatcaatgaagccttggacttt
gttggagtgcaccaagaacgcatactacagtgtctgaatgcagttcgaacagtgcagagc
ttggcttgtttggacgaggcggatcacactgttggcttcttgcttcaactttcaaacttc
tgtaaggagtggcagttccacttgcccaaacttcttagtgacatacagacaaatctgtgt
tacctgtgtcagacgtgcacatacctgctccacagcaagaaaatgctccatcactaccta
caggcaaaaaatggtgaggcattgcccccgggtcccctcccacggactagccggctgcct
ccgaccctctctaaagacgcacccagtggaggggagagagaggaggtggagcagaaagcc
ctcttggctgttcagtgcagtctgctcaagatcctcagcaagacattagcaacactacag
cattttactccagactgctgccagatccttctggatcagtgcatggacctggcagaatat
aggatcttatttgtgctcagtttcactactcctgcatttgacccagatgtccctccttcc
tttgggactttgctggccaccattaatgttgctttgagcatcctgagtgagatggataag
aagaaagaaccagcctccttgagtattgtgtcacttgtttcatcagaggagatccaagcc
ttaaagtcattgcttatatttacaatggagaactgtttctatgtgctgatctcccaagct
gttcgatgtctcaaagacagctctatccctcctagagacaaacagcgactcaaacaggaa
ctcagctctgaactgagtacacttctatcaagcttgtctcgacactttcgtagaggttct
ccctcctctcctgccagtggttttcctttgagtcaaaccaaagctgctactcccaaaagc
agtcatgagggacaggagccttttatccagctggtccaagcctttgtcagacttgtacag
agataa
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integrated database retrieval system
