Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110157794
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Entry
110157794 CDS
T05002
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpec04131
]
110157794 (copa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpec04147
]
110157794 (copa)
Membrane trafficking [BR:
bpec04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
110157794 (copa)
Exosome [BR:
bpec04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110157794 (copa)
Exosomal proteins of bladder cancer cells
110157794 (copa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
110157794
NCBI-ProteinID:
XP_020777837
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETE
VRGISGVDLFGASDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMIVFKLERERPAYAVYGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENSVLLCTRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSADTSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK
LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAEALKETFDP
EKETIPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGKAGQMAADLDMDAP
GGEGWGEDAELQLDEDGYMDAQEGFGDEGGVVKDEGGGGWEVEEDLDLPPELDLPAAAGG
GAEDGFFVPPTKGMSPTQMWCNNSQLPVDHILAGSYETAMRLLHDQVGVVNFGPYKTLFM
QTLSRGRTCFLGLPSLPCLRSHPQRNWKDCGAKQGLPAVGLRLADLISRLQQCYQLTTAG
RFEEAVEKFRAILLSVPLLVVDNKQEITEAQQLITICREYIVGLTMETERKKLPKDTLDQ
QKRLCEMAAYFTHCNLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPDVAQQ
TRKILAACEKNLTDAHQLNYDAHNPFDLCAASYVPLYRGRPVEKCPLSGACYCPTYKGQI
CRVTQVTEIGKDVIGLRVSPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgcttaccaagtttgaaaccaaatcggcccgtgttaaaggcctcagtttccaccctaaa
aggccctgggttcttgcgagtttgcacaatggcgtgatccagctgtgggactatcgtatg
tgcactctcattgacaagttcgacgagcacgatggacccgttagaggaatcgatttccat
aaacagcagcctcttttcgtgtctggaggtgatgactacaaaattaaggtgtggaactac
aaactgagacgctgcctcttcactctccttggacacttggactacatccgaaccaccttc
tttcaccatgagtacccttggattctgagcgcttcagatgaccagacaatccgcatctgg
aactggcagtccaggacctgtgtctgtgttttgaccggacacaaccactatgtgatgtgt
gctcagttccacccgtctgaggacctggtggtgtcggcgtcactggaccagaccgtgcgc
gtgtgggatatctctggtctgaggaagaagaacttgtctcctggagccgtggagactgaa
gtgagggggatctctggagtcgacctgtttggagcttcagacgcggtggtcaaacatgtg
ctggagggtcatgaccgtggagtgaactgggcagcgttccatcccagcatgcctctgatc
gtctccggcgctgacgacagacaggtcaaaatctggaggatgaacgagtctaaggcgtgg
gagttggacacctgccgtggtcactacaataacgtctcctgcgcggttttccatccgcgt
caggagctgattctgtccaactctgaggacaaaagcatcagagtctgggacatgtccaaa
agaaccggggtccagactttcaggagggaccacgacaggttctgggtcctgggggctcat
cccaacctcaacctgtttgctgccggtcatgacagtgggatgatcgttttcaaactggag
agagagcgtcctgcttacgccgtctatggaaacatgctttactatgttaaagacagattc
ctccgacagctcgacttcaacagcagcaaagacaccgccgtcatgcaactgcgcagtggg
tccaagttccctgtgttcagcatgtcttacaatcctgcagagaactccgtcctcctctgc
actagggcgaccaatctggaaaacagcacttatgacttatactccattcccaaagaaagt
gactcccagaaccctgatgctcctgaggggaagaggtcctctggtctcaccgctgtgtgg
gtggccagaaacagatttgcagtcctggatcgtatgcactcactgctgattaagaacctg
aagaatgagattgtgaagaaggtgcaggttccttcttgcgaggagatcttttacgccggg
acaggctctctgctgctccgagacgcagacggagtcacgctgttcgacgtccaacagaaa
cgctccctcgccaccgtgaagatcgccaaagtgaaatacgtggtgtggagcgcggacacc
agccacgtggccctgctcgccaaacatgcgatcatgatctgcaaccgtaaactggagtct
ctgtgtaacatccacgagaacatccgagtgaagagtggagcctgggacgagagcggagtc
ttcatctacaccacctccaaccacatcaaatacgccctcacctctggagaccatggtata
atccggaccctggacttgccgatctacgtgaccagagtccgagggaacagtgtttactgt
ttggaccgagagtgccgccccagagtcctgaccatcgaccccacagaatatcgttttaaa
ctggccctggtcaaccgcaaatacgatgaggtcctccacatggtgcgtaacgccaaactg
gtgggacagtccatcattgcatacctgcagaagaagggctaccccgaggtcgctctgcac
tttgtcaaagacgagaaaactcgcttcagtctcgctctggagtgtggaaacattgaggtg
gcgctggaggcggctaaagcgctggacgagcgctcgtgttgggagcgtctgggagaagcg
gctcttcttcaggggcatcaccaggtcgtggagatgtgctaccagcgaaccaagaacttt
gacaaactcaccttcctctacctcatcaccggaaacctcgccaaactgaggaagatgatg
aagatcgccgagatcaggaaggacatgagtggacattaccaggcggctctgtatctggga
gacgtgagcgagagagtgcgcatcctcaagaactgtggacagaagtccttggcatatctg
accgctgcaactcacggactggacgaagaggccgaggctctgaaggagacgtttgaccca
gaaaaggagacgatcccagaggtggacccaaatgcccagctcctacagcctcctcctccc
atcaaccctctggacacaaactggcctctgctcactgtgtccaagggcttctttgaggga
gccatcgccgccaagggtaaagctggtcagatggctgctgatctggacatggatgctcct
ggaggagaagggtggggagaggacgcagagctgcagctggacgaagatggttacatggac
gcccaggagggatttggagacgagggtggcgtggtgaaggacgagggcggaggaggatgg
gaagtggaggaggacctggaccttcctccagagctggacctcccggcggctgcaggtgga
ggggcagaagatgggttctttgtgcctccaaccaaaggcatgagtcccacacagatgtgg
tgcaacaactcacagctgcccgtggaccacatcctggccggttcctacgagaccgccatg
aggttgctgcacgaccaggtgggtgtggtgaacttcggtccatataagaccctcttcatg
cagactttatccagaggacgcacctgtttcctgggactgccctctctgccctgtctgcgc
agccacccccagagaaactggaaggactgtggagcgaagcagggcctccccgctgtgggc
ctgcgtctggccgacctcatctctcgtctgcagcagtgctatcagctcaccaccgcggga
cgctttgaggaggccgtggagaagttcagagccatcctcctgtctgtgcctctgctcgtg
gtcgacaacaaacaggaaatcaccgaggctcagcagctgataaccatctgcagagagtac
atcgtaggtctcaccatggaaacagagaggaagaagttacctaaagatactctggaccaa
cagaaacgactttgtgagatggcggcgtacttcactcactgtaacctgcagcccgtccac
atggtgctggttctgaggacggctctgaatcttttcttcaaactcagaaactttaaaacc
gctgcaggattcgcccggcgtctcctggagctcgggcccaaaccagatgtggctcagcag
actcgtaagatcttggctgcgtgtgagaagaacctgactgatgctcaccagttgaactac
gatgcccataaccccttcgacctttgcgccgcctcatacgtgcccctgtaccgcgggcgc
ccagtggagaagtgccctctgtccggagcctgctactgccccacatacaagggccagatc
tgcagggtcacacaggtgactgagattggaaaagatgtgatcggtctgcgcgtcagtcca
ctccagttccgctaa
DBGET
integrated database retrieval system
