Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110157858
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Entry
110157858 CDS
T05002
Name
(RefSeq) ATP-dependent RNA helicase DDX19B-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03013
Nucleocytoplasmic transport
bpec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110157858
03015 mRNA surveillance pathway
110157858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110157858
Enzymes [BR:
bpec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110157858
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110157858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF285
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110157858
NCBI-ProteinID:
XP_020777901
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MSEDSWALAVDLQEATTEPIKNIRPREVKSSSSGDVEAEGEKPNLAEQSLLNKLIRTSLV
RNRNQVEVLQRDPNSPLFSVKTFEELRLKPELLQGIYNMGFNRPSRIQENALPMMLAQPP
QNLIAQSQSGTGKTAAFSLAMLSNVNPANKWTQCLCLAPTYELALQIGQVIKQMGSFYPR
IKVAYAIRGTRIPRGVVLQEQIVIGTPGTLLDWCTKYKVIDPKKISVFVLDEADVMIATQ
GHLDQSLRIHRLLPADCQMLLFSATFEDSVWKFAERVVPEPNIIRLKREEETLDTIKQFY
VVCTEKEDKFTALCNLYVCLTIAQAMIFCHTRRMAAWLTSQLNEEGHQVALLSGEMTVEQ
RAAVIERFRNGQEKVLVTTNVCSRGIDVEQVSIVVNFDLPMDLDGNADNETYLHRIGRTG
RFGKRGFAVNMVDSEHGMELLHQIEMHFNRKITKLDTENVEQMEKLFQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagattcgtgggcgcttgctgtggacttacaggaagccacaactgaaccgata
aagaacatcaggccaagagaggtcaaaagtagtagcagtggagatgtggaggcggaggga
gagaaacccaatctggccgagcagagtttgttgaataaactgatcagaaccagtctggtg
aggaacaggaatcaggtggaggtacttcagcgagaccccaactccccactgttctctgtg
aagacatttgaggagctccgactaaaacctgaacttttgcaggggatctacaacatgggc
ttcaaccgaccatctcgcatccaagagaacgcgctgcccatgatgctggcacaaccacct
cagaatttaattgcccaatcacagtctggaacggggaaaactgcggccttctctctggcc
atgctcagcaacgtcaacccggccaacaagtggactcagtgcctgtgtctcgctcccaca
tatgagctggctcttcagatcggccaagtgatcaagcagatggggagtttttatcctcga
atcaaagtggcgtatgccataagaggcaccagaattcctcgtggtgtggtgctgcaggag
cagatagtgatcgggacccccggcacactgctcgactggtgcactaaatacaaagtgatc
gacccgaagaagatctctgtgtttgtgctggacgaggccgacgtgatgatcgctacacag
ggacacctggaccagagcttacgcatacacagactcctacccgctgactgtcagatgttg
ctgttttccgccacctttgaggactctgtgtggaagtttgccgagcgcgtggtccctgaa
cccaacatcattcgactgaagcgcgaggaggagactctggacacaataaaacagttctat
gtggtctgcaccgagaaggaagacaagttcaccgccctctgcaacctgtacgtctgcctc
accatcgcacaggccatgatcttctgccatacccgcaggatggctgcttggttgacttcg
cagttgaacgaggagggtcaccaggtggcgctgttgagtggtgaaatgacagtggagcaa
agagctgcagtcattgagaggttcaggaacggccaggagaaagtgctcgtcacaaccaat
gtgtgctccagaggtatcgacgtggagcaggtgtccatcgtggtgaactttgacctcccg
atggacctggacggaaacgctgataacgagacatacctacaccggatcggccgcacgggg
cgcttcggcaaaaggggcttcgctgtcaacatggtggacagtgaacacggcatggagctg
ctgcaccagattgaaatgcacttcaaccggaaaatcacaaaactcgacactgaaaatgtt
gaacagatggagaagctgtttcagtga
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