Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110157913
Help
Entry
110157913 CDS
T05002
Name
(RefSeq) embryonic polyadenylate-binding protein B-like
KO
K13126
polyadenylate-binding protein
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03015
mRNA surveillance pathway
bpec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110157913
09123 Folding, sorting and degradation
03018 RNA degradation
110157913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110157913
03041 Spliceosome [BR:
bpec03041
]
110157913
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110157913
mRNA cycle factors
Stress granule specific factors
110157913
Spliceosome [BR:
bpec03041
]
Complex C
Other components
Complex C specific factors
110157913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RBD_DEAH11
RRM_occluded
RBD_RDR6
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
110157913
NCBI-ProteinID:
XP_020777962
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MNSSGPAYPLASLYVGDLHPDVTEAMLYQKFSPAGPITSIRVCRDIITRRSLGYAYINFQ
QPADAECALDTMNYDVLKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFS
AFGNILSCKVVCDEKGSKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKERE
LEYGTKSIKFTNVYVKNFGDNFTDEKLKEAFSAFGKTLSVRVMKDEKGVSRGFGFVNYAY
HDDAQKAVDEMNGKELNGRIIYVGRAQKRLERQGELKRKFDQIKQDRIQRYQGVNLYVKN
LDDTIDDERLRKEFAPYGTITSAKVMTDGSQSKGFGFVCFSSPEEATKAVTEMNGRIIAT
KPLYVALAQRREERKAILTNKYMQRIASMRSMPSPLIDSYQQAGYYMTVPQPHSRSYYNH
GAMSNMRPVPRWAGQLPKPQGPYSSQYNTGPRRGSIATVKQASTQVPHVISGTHKTNNIG
TQTIGGRGDMGVGRSNQYKYSTGVRNPQVAQTPLKRMQSMMEPVGHMSGQEPLDATMLAS
APLMDQKQLLGERLYPLIQAYHPNLAGKITGMLLEMDNTELLHMLESPESLHAKVDEAIA
VLKAHQAKDLSPK
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagtggaccggcttacccactggcttctctttatgtgggggacctgcacccc
gatgtgactgaggccatgctgtatcagaagttctctccggcgggacccatcacgtccatc
agggtctgtagggacattatcactcgccgatctctgggatacgcctatatcaacttccag
caaccagcggatgctgaatgtgctctggacacaatgaactatgacgtccttaagggtcga
cccatccgaataatgtggtcccagcgtgacccaggactgaggaagtctggagttggaaac
attttcatcaaaaacatggatgaatccattgacaacaaggcactctatgacaccttctct
gcatttgggaatattttatcctgtaaggttgtttgtgatgagaaaggatccaaaggctac
gggtttgtccattttgaaactcaggaagctgcaaatcgagccatagagaccatgaatggg
atgctgctgaatgatagaaaggtttttgtgggtcattttaaatcccgcaaagaaagagag
ctggagtatggcacaaaatctatcaaattcaccaatgtgtatgttaaaaactttggtgac
aacttcactgatgagaaactcaaagaggctttttctgcatttggaaagacactgagtgtg
cgtgtgatgaaggatgagaagggtgtgtcacgtggatttggatttgtgaattacgcctat
cacgatgatgctcaaaaggctgtcgatgaaatgaatggaaaagaactcaatggcagaata
atttatgtgggtcgtgctcagaagagactggagcgccagggagaacttaagcgcaaattt
gaccagatcaaacaagaccgaatccagcgctaccagggtgtgaatctttatgtgaaaaat
cttgatgacaccatagatgatgaaagactcaggaaggagtttgctccttatggtaccatc
accagtgcaaaagtaatgacagatggctcccagagcaaagggtttggatttgtgtgtttc
tcatcaccagaggaagcaacaaaagctgtaactgagatgaacgggagaatcattgccacc
aaacctttgtatgtggctcttgctcaacgtagagaggagcggaaggccatcctgaccaat
aaatacatgcagaggatcgcatccatgaggtccatgcccagccccctaatcgactcctat
cagcaggcaggatactatatgactgtaccgcagccccattctcgatcctactataaccat
ggtgctatgagtaacatgagaccagttcctcgctgggctggacaactgcccaaaccacag
ggaccatattcatcccagtataacactggtccgcgccgtggatctattgctactgttaaa
caagcttccacccaagtgccacatgtcatctctggaactcacaaaacaaacaacattggg
acccagactataggagggagaggtgacatgggtgtgggcaggagtaaccagtacaagtat
tctactggagtgagaaacccccaagtggcacaaactcctttaaaaagaatgcagtctatg
atggagcctgtgggtcacatgtcaggtcaagagcctctggatgccaccatgttggcatca
gctcctctaatggatcaaaaacagcttctgggtgagcgactctaccccctgatccaggct
tatcatccaaacctggcaggaaaaattacagggatgttactggaaatggacaacacagag
ctgctgcacatgctcgagtccccggagtcccttcatgccaaggtggatgaggcaattgct
gttcttaaagcccaccaagccaaagacctatctccaaagtag
DBGET
integrated database retrieval system
